KEGG   Miscanthus floridulus: 136519963
Entry
136519963         CDS       T10264                                 
Name
(RefSeq) exopolygalacturonase-like
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
mflo  Miscanthus floridulus
Pathway
mflo00040  Pentose and glucuronate interconversions
mflo01100  Metabolic pathways
Module
mflo_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    136519963
Enzymes [BR:mflo01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     136519963
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim Beta_helix
Other DBs
NCBI-GeneID: 136519963
NCBI-ProteinID: XP_066369460
LinkDB
Position
18:complement(94094360..94095775)
AA seq 402 aa
MPLRLAAALLLLATATTSWFAEVATAGRVFNVSDFGAVADGRTDDSEAFLRAWTKACATP
GRAAVVVPRGDYLLHPLVFRGPCKGYMEVHVRGVLRAPPGLGAFRGCREWVHFSSIDGLL
VTGGGTFDGRGATAWPLNECPQKRDCKLLPTSIKLGLVRNATITGVTSLDSKFFHVTVVG
SHDVRIHRVSIRAPRSSPNTDGVHIQGSSNVHVTDCAVATGDDCVSVGPGASDVVVSGVS
CGPGHGISVGSLGRYPGEEDVRRLRVANCTLAGTSNGVRIKTWRGETWPTAVSGLVFEDI
VMRKVRNPIIIDQEYCPYASCRESEQRPSAVRISDVKFRNIRGESATKVAVKLSCSEASP
CRELELRDIDLRYVKRGVATQSRCAHVAGGVVGGTLVPPSCI
NT seq 1209 nt   +upstreamnt  +downstreamnt
atgccactgcgcttagccgccgctctgcttctcctggccacggcgacgacgtcgtggttc
gcggaggtcgccactgccggccgcgtcttcaacgtctcggatttcggcgcggtcgccgac
gggcgcacggacgattccgaggctttccttcgggcgtggacgaaggcgtgcgcgacgcca
gggagagccgcggtcgtcgtccccaggggcgactacctgctgcacccgctggtgttccgg
ggtccctgcaagggctacatggaggtccacgtccgcggcgtcctccgcgcgccgccggga
ctcggcgccttccgtggctgccgcgagtgggtccacttctccagcatcgacgggctgctc
gtcaccggcggcggcacgttcgatggccgcggcgccacggcgtggccgctcaatgagtgc
ccgcagaaacgcgactgcaagcttctgcccacctccatcaagctcgggctggtgaggaac
gcgaccatcacgggcgtgacgtcgctggacagcaagttcttccacgtcacggtggtgggc
agccacgacgtgcgcatccaccgcgtgagcatccgcgcgccgcgcagcagccccaacacg
gacggcgtgcacatccagggctcctccaacgtgcacgtcacggactgcgccgtggccacc
ggcgacgactgcgtctccgtcggaccgggcgcctcggacgtggtggtgtccggggtgtcg
tgcgggccgggccacggcatcagcgtgggcagcctcggcaggtaccccggcgaggaggac
gtgcggcggctgcgcgtggccaactgcaccctcgccggcacgtccaacggcgtgcggatc
aagacgtggcgcggcgagacctggcccaccgctgtgtccgggctcgtcttcgaggacatc
gtcatgaggaaggtccgcaaccccatcatcatcgaccaggagtactgcccctacgcctcc
tgccgcgaatcggagcagcggccgtcggcggtgaggataagcgacgtcaagttcaggaac
atccggggcgagtcggcgaccaaggtcgccgtgaagctgtcgtgcagcgaggcgagcccg
tgccgggagctggagctcagggacatcgacctgcgctacgtcaagcgcggcgtcgccacg
cagtcgcggtgcgcgcacgtcgccggcggtgtggtcggcggcactctagtccctccctcg
tgcatatga

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