Miscanthus floridulus: 136520232
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Entry
136520232 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding KH domain-containing protein RCF3-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136520232
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
136520232
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Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
Motif
Other DBs
NCBI-GeneID:
136520232
NCBI-ProteinID:
XP_066369777
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Position
18:72162577..72175637
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AA seq
667 aa
AA seq
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MDRSRSKRGYHYDQDSPPPRSKQRFDRRSGGGGQNANSSYHRRGPPGGGGGSDRRGFLPP
DAAPPPPPPPPPPSSAAAGGGAGPTTTTSFRILCPECKAYGFPPGFVAKVRDESGAFVTV
HPPFAGDYVRVIETVDGARREADGRPPMFSPAQEAILMVHHRILETDADDGDEDGEYGPR
GKDPRDRGKTTTRLIVPKLHVGCLLGKGGKIIEQMRMETKTHIRILPRDQHTPRCVSLSE
EVVQVVGDGNCVKKAVAIITDRLKESLHRDRGPFRGRMNSPEPRISQEDEYLGGVQQMPA
YEESLGRPDQIRNNISMEPPGYEFDSNGGKVIEHADILYDDIVFRILCPNDKADSLVATR
DGILEMLQADVGVDVRLSDIIAGSDERVVIITSREGPDHELFPAQEAVLHIQTHIVDLGP
DKDNIITTRLLVPSSEIACFDGREGSLSDIQRQTSANVQILPREDLPSCALESDELIQIV
GEIRAARNALIQVTTKLRSFLYREMSGPIQVGNINVHGAISPVAGSPRGPYQGNDIPIGT
YHQASQLATSWHSKDSGGSASGSFEQGSNINDDIRQSATKRFAVPLVTRSTLEVVIPNSA
VASLTMRAGSKLAQISEISGATVTLAEDRPDILEKVVRISGTPEQASKAENLLQGFILSI
PDDIPSG
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggatcgctcccgctccaagcgcggctaccactacgaccaggactccccgccgccccgc
tccaagcagcgcttcgaccgccgcagcggcggcggcggccaaaatgctaactcgagctac
caccgccgcggcccccccggcggcggcggtggctccgaccgccgcgggttcctgcccccc
gacgccgcgccgcccccgcccccgcctcctcctcctccctcgtcggccgctgcgggcggc
ggcgctggtcccaccaccaccacctccttccgcatcctgtgccccgagtgcaaagcctac
ggcttcccacccggcttcgttgccaaggtccgggacgagagcggcgcgtttgttactgtg
cacccgcccttcgcaggcgactacgtccgggtcatcgagacggtcgacggcgcgaggcgc
gaggcggacggccgcccgcccatgttctccccggcccaagaggcaatcctcatggtgcac
caccggatcctcgagaccgacgctgacgacggcgacgaggacggcgagtatgggcccagg
ggcaaggaccccagggacagggggaagaccaccacacgactcatcgtgcccaagctgcat
gtcggatgcctgctcggcaaaggcgggaagatcatagagcaaatgaggatggagaccaag
acgcacatcaggatcctgccgcgtgaccagcacacaccgcgctgtgtctccttgtccgag
gaggttgtacaggttgttggagatggaaattgtgttaagaaggctgtagcaataatcact
gatcgcctaaaggaaagcttacaccgtgatcgtggtcccttccgtgggcgaatgaattca
ccagagcctcgaatttctcaggaagatgaatatttgggtggtgttcaacagatgcctgca
tatgaggaatctttgggacgacctgatcagattaggaacaacattagcatggagccacca
ggatatgagtttgattcaaatggtggcaaggtcattgaacatgcagatatcctgtacgat
gacatcgtttttcgaattctatgcccaaatgacaaggctgacagtttagttgcaacgcgt
gatggaatactagagatgctacaggctgatgttggtgttgatgttaggctatctgatatt
attgctggttctgatgaaagggtagtaatcatcacatccagagagggcccagaccatgag
cttttcccggctcaggaagcagtgctgcacattcaaactcatattgtagaccttggccca
gacaaggataacattatcacaacaagactacttgtaccttcaagtgaaattgcttgcttt
gatggaagggaggggtcattatctgatatacagagacagactagtgcaaacgtgcagata
ttaccaagagaagatcttccatcatgcgctttagagtctgatgaactcatacagattgtt
ggagagattagagctgctcggaatgctctgatacaagtaacaacaaaattaaggagtttt
ctataccgtgagatgtctggccctattcaagttggcaatatcaatgtacatggagccatt
tctccagtagcaggttcacctcgaggaccataccagggaaatgatattccaattggtact
tatcaccaagcatcacaactggcaacttcatggcattcaaaggatagtggaggcagtgca
agtggctcatttgagcaaggcagcaacattaatgatgatatcaggcaaagtgctacaaaa
agatttgctgttcctctagtgactaggagcacactagaggttgtcataccaaacagtgct
gttgcaagcctcaccatgagagctggtagcaagcttgctcaaataagcgagatctctggt
gctactgtaacgctagctgaggacagacctgacatcttggagaaagttgttcgaatatct
ggtacccctgagcaggctagcaaagctgagaatttgctgcagggatttattcttagcatt
ccagatgacattccttcaggctag
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