Miscanthus floridulus: 136520339
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Entry
136520339 CDS
T10264
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03040
Spliceosome
Brite
Enzymes [BR:
mflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
136520339
Spliceosome [BR:
mflo03041
]
Complex C
Other components
Step II factors
136520339
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GFIT
Other DBs
NCBI-GeneID:
136520339
NCBI-ProteinID:
XP_066369903
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Position
18:28214157..28226055
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AA seq
704 aa
AA seq
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MPSPSPLPPVLPISEHEDEIVAAVDANPVVVVIGETGSGKSTQLSQILHRRGYTRRGAIA
VTQPRRVAAVSVSRRVAQELGVPLGDEVGYAIRFEDRTSERTCIKYLTDGILLRESLSNP
ELKQYSVIILDEAHERSLNTDILLGLMKRLIKDRASDLKVLITSATLDGLKVSKFFSGCP
VLNIPGTLFPVEKFYSTERPTNYIESSLRTAIDIHAKEPPGDVLIFMTGKDDIDKMVSKL
EESIQNLEEGSCIDALVLPLHGSLPPELQVRVFAPAHPNCRRFIVATNVAETSLTVDGVV
FVIDCGYVKQRQYNPSSGMYSLDVVQISRVQADQRAGRAGRTRPGKCYRLYPISIYQNEF
LEATVPEIQRSSLAGSVLYLKSLNLPDINILKFDFVDPPSRESLEDALRQLYLIDAIDEN
GQITDVGRVMAELPLEPSLSRTLIEANELGCLSQALTVASILSAEITLRSASKDMDGKRK
RQELPDGSGWGDHIQLLQIFESWDQSGYDPKWCSDHDLQVRSMKLSKDVRNQLCQIIKKI
AKGSTDVHARKSRKSDPDYRKLRRALCVGYGNQLAERMLHHNGYHTVGYRTQLVQVHPSS
ALEGDEYGKFPMYVIYHELISTTRPYMRNICAVEQAWVEPILKKLEKLDVNRLSGGSSAP
KASELLVENKQVNSFKKDMDVKQSEVDSKIQAARDRYLARKGKK
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctccatctccgctgccgccagtgctgccgatctcggagcacgaggacgagata
gtcgccgcggtggacgcgaaccctgtggtggtggtcatcggcgagaccggctctggcaag
agcactcagctctcccagatcctccaccgccgcggatacacccgtcggggcgccatcgcc
gtcacccagccccgccgcgtcgctgcggtctccgtttccagaagagtagctcaagagctt
ggtgttccacttggggatgaagttggttatgcaatccgatttgaggacagaacttcagaa
agaacatgcataaagtacctcacggacggcattcttcttcgtgaaagcctttcaaatcct
gagttgaagcaatactcagtaatcatactggatgaagctcacgagcgtagtttaaacact
gatatccttttaggtttgatgaaaagattgatcaaggaccgagcttcagatttaaaagtt
ctaatcacctctgcgactcttgacggtttaaaagtttcgaagttcttctcaggatgccct
gtgttaaacatacctggaactttgttccctgtggagaaattttacagcactgaacgccca
acaaattatatagaatcttcactcagaacagctatagatatccatgccaaggaacctcct
ggggatgtcttaatatttatgacaggaaaggatgatattgacaagatggtctcaaaattg
gaggaaagtattcaaaatcttgaggaaggctcctgcattgatgctcttgtccttcctctt
catggttctttgccacctgagctgcaggttagggtatttgctcctgcacatccaaactgc
cgacgcttcattgttgcaacaaacgttgctgaaacttcgctgactgtagatggtgtcgtg
ttcgtgattgattgtggttatgtaaagcagcgccaatacaatccatcaagtggaatgtat
tcacttgatgtagtccaaatcagcagagtgcaggctgatcagcgagcagggcgagctgga
agaactcggcctggcaagtgctataggctatacccaatttccatatatcagaatgagttt
cttgaggcaacagttcctgaaattcaacgctcttctcttgctggaagtgttctgtatctg
aaatcgttaaatcttccagacatcaacatactgaagtttgattttgtagatccaccatca
cgtgagtcattagaagatgctttgaggcaattatacctcattgatgcaattgatgaaaat
gggcaaataacagatgttggacgagttatggcagagctccctcttgaaccgtctctttca
aggaccttgattgaagcaaatgaattgggatgcctgtctcaagcattaactgttgcttcg
attttgtcagcagaaatcacattgcgatcagctagcaaggacatggatggaaagaggaaa
aggcaggagcttcctgatggttctggctggggtgaccatatacaattgcttcagatattc
gaaagctgggaccaatctggctatgatccaaaatggtgctctgatcatgatttgcaggtg
cggagtatgaaattgagcaaagatgtgaggaaccaactatgccagattattaaaaaaatt
gcaaaaggttcaactgatgtgcatgcaaggaaaagccggaagagtgaccctgactataga
aagctgaggagagctctctgcgtaggatatggtaaccagctagctgagaggatgctgcat
cacaatggctaccatactgttggctataggacccaacttgtacaggtgcatccatcttct
gcactggaaggtgatgagtatgggaagtttccaatgtatgttatttatcatgagctgata
agtacaactcgtccatacatgagaaatatctgtgccgtcgagcaagcctgggttgagcct
atattaaagaagcttgagaaattagatgtaaacagattaagtggtggctcgagtgcaccg
aaagcttctgaacttctagtagagaataagcaagtaaactcgtttaagaaagacatggat
gtaaaacaatctgaggtggacagtaaaatccaggcagctcgagatcgctaccttgcacga
aaaggtaagaaatga
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