Miscanthus floridulus: 136520440
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Entry
136520440 CDS
T10264
Name
(RefSeq) amino acid transporter AVT1C-like isoform X1
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
mflo Miscanthus floridulus
Pathway
mflo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
136520440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mflo02000
]
136520440
Transporters [BR:
mflo02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
136520440
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Paralog
GFIT
Motif
Pfam:
Aa_trans
Trp_Tyr_perm
Motif
Other DBs
NCBI-GeneID:
136520440
NCBI-ProteinID:
XP_066370066
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Position
18:complement(72735958..72742279)
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AA seq
567 aa
AA seq
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MRSPVPERSLIIKSDDDDDTQSALATNWTGHGHDEEEPEQEPGSDSDSSSSSSCATPRRG
PSSPAYTQQWPQSYRQSIDILSSVHSPNLSFLGTPTLSRLSNSFLAITDSFRGKAPETIS
NFIKPLLGPTSSDEQQQQHEDTRKSSQHIMPSRKSSLQQIPEDQKPLVVGHEASHNRNCS
YTQGVMNGINVLCGVGILSTPYAIKQGGWIGLVVLCLFALLAWYTGVLLRHCLDSKEGLE
TYPDIGHAAFGSTGRIVISIILYVELYACCIEYLILESDNLSKLFPTAHLTIGSLTLNSH
VFFAILTTIIVMPTTWLRDLSCLSYISAVGVIASILVVICLFLVGVVNNVGFENEGTALN
LPGIPIAIGLYGYCYSGHGVFPNIYSSLKNRNQFPSILFTCIGLSTFLYAGAAVMGYKMF
GEVTESQFTLNLPDNSLISKVAVWTTVANPITKYALTIIPLAMSLEELLPPNQQKYSTII
MLRSSLVMSTLLIALSVPFFGLVMALVGSLFAMLVTYILPCACFLAILKTKVGWHQIAAC
SFIIAVGVCCACVGTYSSLSKIIQNYT
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcccggtgccggagcgtagcctcatcatcaagagcgatgacgacgacgacacc
caatccgctctcgccaccaactggacaggacacggccacgacgaggaggagccggagcag
gagccgggttcggactccgactcctcgtcgtcctcatcctgcgccaccccacgccgcggc
ccaagctcccccgcctacacccagcaatggccgcagagttacaggcaatcgattgacatt
cttagtagcgtgcactcacccaatctgagctttttggggactccaactctgagcagactg
tcaaactctttccttgccatcaccgattcttttcggggcaaagcccctgaaacaatctca
aactttatcaagccacttcttggccccacatcaagtgatgagcagcagcagcaacatgaa
gatacccgaaagagttctcagcacattatgccctcaaggaaatcatctttgcaacaaatc
cctgaggatcaaaagccactggtagttggtcatgaggcgtctcataatcgaaattgctct
tacacccagggagtgatgaatggaataaatgttctatgtggcgtgggaatcctatcaaca
ccttatgccatcaaacaagggggttggattgggctggtggtactctgtttatttgcattg
cttgcatggtacactggcgtgctcctgcgccattgcctggacagcaaggagggcctcgag
acatacccagatatcggccatgcagcctttggcagcacaggtcgcatagttatctcgata
atactgtatgtggaattgtatgcatgttgcatcgagtatttgatattggagagtgataat
ttgtcaaaattattccccactgcacacctgaccattgggagcctgacgctgaactcacat
gtattttttgcaatcttgactaccatcatagtcatgccaaccacctggctccgtgacctg
agctgtttgagctacatttcagctgtgggtgtcattgcatcaatccttgtggtcatctgc
ctgttcttggttggggttgtcaataatgtcggctttgagaacgaagggactgcactgaac
ctcccaggaattcctattgcaattggattatatggttactgctactcagggcatggggta
tttccaaacatatattcctctctgaagaaccgcaaccagtttccttcaattctttttaca
tgcattgggctgtctacctttttgtatgctggtgctgcagtgatgggatacaaaatgttt
ggtgaagtcacagagtcccaattcacactcaacttaccagataattccctcatttctaag
gttgctgtttggacaacggtggcaaatccaataaccaaatatgcattaactattattcca
ttggctatgagtttggaagagttgctgccaccaaaccaacaaaagtattctacaataatc
atgcttagatcatctctggtgatgtcaaccctcctgattgctctatctgtgcctttcttt
ggacttgtgatggccttggttggttccttgtttgccatgcttgtgacctatattctgcct
tgcgcgtgttttttggcaatcctcaagacaaaagtggggtggcatcagatagcagcttgc
tcgttcatcatagctgtcggggtttgctgtgcctgcgtgggaacatactcatccctgtca
aagataatccagaactacacataa
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