Miscanthus floridulus: 136520461
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Entry
136520461 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
mflo Miscanthus floridulus
Pathway
mflo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136520461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mflo03041
]
136520461
Spliceosome [BR:
mflo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
136520461
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
136520461
NCBI-ProteinID:
XP_066370095
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Position
18:120132677..120137729
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AA seq
552 aa
AA seq
DB search
MGAEEQPSPTRKRDREEEGEDLSDGGAAEKRPRAQGASLLGLATYEDEEEDEAARGHANG
RRAVEPDGEEDEADDDEDDDVRRAPERRPRQVELRRDCPYLDTVNRQVLDFDFEKFCSIS
LSNLNVYACLVCGKYFQGRGLKSHAYTHSLEAGHHVFINLQTEKAYCLPDGYEISDPSLE
DIRHVLNPRFTKEQVLNLDKNKQWSRALDGSNYLPGMVGLNNIKETDFVNVTIQSLMRVT
PLRNFFLIPENYQHSKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASDKRFQIG
VQSDPVEFMSWLLNTLHAKLKSSKKKNRSIIHDCFQGELEVVKEVHRKHIMEKREDGDEL
NGEAGSVVGTADGIVTETSKVPFLMLGLDLPPPPLFKDAMEKNIIPQVPLFNILKKFDGE
TVTEVVRPSIARMRYRVTRLPKYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPL
PKPKENHKLRSKYDLIANIVHDGKPGEGCYRVFVQRKSEEAWYEMQDLHVTETLPQMVAL
SETYMQIYEQHE
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcagaagagcagccatccccgacgcggaaacgcgaccgcgaggaagaaggggag
gacctctccgacgggggcgccgccgagaagcggccgcgcgcgcagggcgcgtccctgctg
gggctggctacctacgaggacgaggaggaagacgaagcggccaggggccacgcgaatggc
cgacgcgcggtggagcctgatggggaggaggacgaggcggatgacgatgaggacgacgac
gtgaggagggctccggagaggaggccaaggcaggttgagctgcgccgggactgcccgtac
ctcgacaccgtgaacagacaggttcttgattttgattttgagaagttctgttcaatctcc
ttgtcaaatttgaatgtgtatgcgtgcttggtctgtggaaaatatttccaaggaagaggg
ttaaaatctcatgcatatacacacagtcttgaagcaggccatcatgtgttcattaatctt
caaaccgagaaggcttattgtcttcctgatggatacgagattagtgatccatcgttagaa
gatattcggcatgttctcaatccaaggttcactaaagagcaggttctaaatcttgacaaa
aataagcagtggtctagagcacttgatggctccaattatctacctggaatggtgggtctt
aacaacatcaaggagactgattttgtgaatgtcacaatacagtcattaatgagagttacg
cctctgagaaatttctttctaatccctgaaaactatcagcatagcaaatcaccattggtt
catcgttttggggaattgacacgtaagatttggcatgctaggaacttcaagggccaggtt
agtccacatgagtttctgcaagcagttatgaaggccagcgacaaacggtttcagattggt
gtacagtcagatccagtggaatttatgtcatggctcttaaacacactgcatgcgaaacta
aaaagctcaaagaagaaaaacagaagcataatacatgattgctttcagggagaacttgaa
gttgttaaggaggttcataggaagcatataatggaaaaaagagaggatggcgatgagctg
aatggtgaggcaggttcagtggttggaactgcagatggaattgttactgaaacatctaag
gtcccattcctgatgctcggtcttgacctgccacctccacctcttttcaaagatgccatg
gagaaaaatatcattccacaggtaccattatttaacatactgaagaagtttgatggtgag
actgtgacggaggttgtccgaccatccattgcccgaatgaggtaccgagtcactagactg
ccgaagtatctgatccttcatatgcgaaggtttaccaaaaataatttctttgtcgagaaa
aaccctactctagttaattttcctgtgaagaacttggaattgaaggactacattccatta
cctaagccgaaagagaatcataagctacgttcaaagtatgacctcatagcaaacattgtc
catgatggcaaaccaggcgaaggatgctacagagtatttgtacagcggaaatcagaagag
gcctggtacgagatgcaggacctccatgttactgagactcttcctcaaatggtagctctc
tcagaaacctacatgcaaatatatgagcaacacgaatga
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