Miscanthus floridulus: 136520654
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Entry
136520654 CDS
T10264
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
mflo Miscanthus floridulus
Pathway
mflo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136520654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136520654
03036 Chromosome and associated proteins [BR:
mflo03036
]
136520654
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
136520654
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
136520654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
136520654
NCBI-ProteinID:
XP_066370348
LinkDB
All DBs
Position
18:30670578..30676293
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AA seq
933 aa
AA seq
DB search
MFGSTNPFGQSSTSPFGQTSFGTPQGFGQSSIAANNPFAPKPFGSPTTTFGAQTGSSLFA
TTSTGAFGQQQSTPTFGTTSTGAFGQQQSTPTFGTPSSSPFGSSTPAFGASPTPAFGATP
SGSLFGQKPSFGGFGSSHSQSGPFGSTFQQTQPTFGSSTFGSSTTPAFGTTTTPAFGTTT
PAFGTTTTPAFSASTTPAFGSTSTSLFGASSTPAFGSTAFGTSSTGFGTSGTTAFGVSST
TPGFGSSNTPSFGTSASAFSFGSSPSFGQTPVSSGSTPFGTTPSPFGAPAPAFGSQTAAP
AFGQPQFANQAGGTRIKPYSQTPDVDSATSGTQPAAKLDSISAMPEYKDKSHEELRWEDY
QRGDKGGPNTSGTPAVAPSFPSSMPQNAFVSTSNPNPFNQPATNPFSTNNLFAPKPASTI
TSPFSTSSFNNVSVTSSSPFTSSSSTTMFGQTGVSTFPANNSPSLFGNTNPAPSTSSLFG
TSMTNNSSPFGTGSSLANTRSAPLFSSAFAQQTSSTPAFSSGSLFGSTNPGGLFSSSGPS
LFPTSTFQPSPPGQTSNIFSFQPAIQPAASTGGFPGFSNTTNQALMGQPTPSQSSMVMQP
APVSNPFGTLPAMPQMSIGNGGSSPSVQYGISSLPVAEKPLPSRSLSMAVPRHLSQRRIK
LLPRKYNPISDSKVPFFADDEESPATPKADAFFIPRENPRNLVIRPIEQWPSRRETDRQS
TLKNATDLNKYEDVSTESERGKSAMSPSIRPPAVENGNQHEARAMVQHGNGNVTSVERLL
PKLPRAYYFTEPSIEEIAAKERAEAGYCGRVRDFVVGRHGYGSIKFLGETDLRCLDLESI
VEFNNREVIVYKDDNKKPPVGEGLNKAAEVTLLNIKCVNKKTGEQYYEGARVERYREMLV
KKAEEQGAEFVSFDAAKGEWKFRVKHFSAYGLW
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctccaccaacccattcgggcagtcgtccaccagcccatttggccagacctca
tttggaactccgcagggattcggccagtcttccattgctgccaacaatccctttgcccca
aaaccgtttggcagcccaacgacaacttttggggcacagactggaagctcgctctttgca
actacatccactggtgcctttggccagcagcaatccactcccacatttggcacaacatct
actggtgcctttggccagcagcaatccactcccacatttggcaccccatcctcctctccg
tttgggagctccacaccagcctttggcgcatcccccactcctgcctttggtgccacaccc
tctggatctttgttcggacagaagccaagttttgggggttttgggtcatctcatagccag
tcaggtccttttggtagcacgttccagcaaacacaaccaacatttggcagcagcactttt
ggttcatcaactacgccggcgtttggtaccacgactacgcctgcatttggcacaactacg
ccagcctttggcaccacaactacacctgccttcagtgcatcgactaccccagcatttggt
tcaacatcaacatctttatttggtgcttctagcacaccagcatttggttctacagccttt
ggtacatcttctactggttttggaacttcagggactacagcatttggtgtaagtagtact
actccaggttttggatcttcaaacacaccttcatttggcacatcagctagcgcattcagt
tttggttcttcaccatcttttggacaaacaccagtttcctctggtagcactccctttgga
acaactccgtcacctttcggtgcaccagctcctgcatttggctcacagacagcagcgcca
gcttttggacaaccacaatttgctaatcaggctggaggaaccagaataaaaccttattct
caaacaccagatgttgacagtgctactagtggtactcagcctgctgcaaaacttgattcc
atatcagcaatgcctgaatacaaagacaagagtcatgaagaattgaggtgggaagactac
cagcgtggagacaagggtggaccaaacacttctggaactccagcagtggcacctagcttt
ccatcatcaatgccacagaatgcttttgtttcgacaagcaatcccaatccatttaaccag
cctgcgacaaacccattttcaacaaacaatctatttgctcctaagcctgcttcaactatt
acttcaccattcagcacctcatcatttaacaatgtatcagttacaagttcgagcccattc
acatcatccagtagtaccacaatgtttgggcaaacaggtgtttctacatttccagcaaat
aattcgccatcattatttggaaataccaatcctgctccttctacatcgtcattatttggc
acatcaatgacgaataattcaagtccattcggcactggctcatcgttggctaacactcgg
tcagccccactattttcatcagcatttgctcaacagacatcaagtacaccggctttctcc
tctgggagcctatttgggtcaactaatcctggtggtctgtttagcagtagcggtccttca
ctttttccaacatcaacatttcagccatctccccctggtcaaacttctaacatattctcc
ttccaacctgcaattcaaccagcagcttctacaggtggattccctggtttttccaacact
acgaatcaggccttgatgggacagccaactcctagccagtccagtatggtcatgcagcct
gctcctgtttcaaatccatttgggacgcttccagcaatgcctcagatgtccattgggaat
ggtggatcttcaccttcagttcaatatggaatatcaagtttgccagttgctgagaagcct
cttccaagtagatcattgtccatggcggttcctaggcatttgtcacagagaaggataaaa
ctgctcccaagaaaatataatccaatatctgatagcaaggttccattctttgctgatgat
gaagaatctccagcaacaccgaaggcggatgcttttttcatccctagagagaacccaagg
aatctggtaattcgtccaattgagcagtggccttcgcggagagaaactgaccggcaatcg
actttgaagaatgccactgatttgaacaaatatgaagatgtttccactgaaagtgagcgt
ggtaagtctgccatgtcaccaagcatcaggcctcctgcagtggaaaatggcaatcagcat
gaggccagggccatggttcagcatgggaatggaaatgttacttcagtcgagaggttgttg
cctaagcttccacgtgcatattacttcacagagcctagtatagaggagattgcggccaaa
gaacgtgcggaggcaggctactgtggccgggtgagggactttgtcgtggggcgacatggc
tacggtagcatcaagtttctgggggagacggacttgaggtgcctggatctggagtcaatc
gtggagttcaacaaccgggaggtgattgtgtacaaggacgacaacaagaagccccctgtg
ggtgaggggctgaacaaggccgcggaggtgactctactgaacatcaagtgcgtaaacaag
aagaccggggagcagtactacgagggggcaagggtggagaggtacagggagatgctggtg
aagaaggcggaggagcagggcgcagagtttgtgtccttcgatgctgccaagggagagtgg
aagttcagggtgaagcacttcagcgcctatgggctttggtga
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