Miscanthus floridulus: 136520687
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Entry
136520687 CDS
T10264
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
mflo Miscanthus floridulus
Pathway
mflo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136520687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136520687
03036 Chromosome and associated proteins [BR:
mflo03036
]
136520687
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
136520687
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
136520687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
136520687
NCBI-ProteinID:
XP_066370412
LinkDB
All DBs
Position
18:complement(2396400..2401781)
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AA seq
933 aa
AA seq
DB search
MFGSTNPFGQSSTSPFGQTSFGTPQGFGQSSTAANNPFAPKPFGSPTTTFGAQTGSSLFA
TTSTGAFGQQQSTPAFGTTSTGAFGLQQSTPTFGTPSSSPFGSSTPAFGASPTPAFGATS
SGSLFGQKPSFGGFGSSHSQSSPFGSTFQQTQPTFGSSTFGSSTTPAFGTTTTPAFGTTT
PAFGTTTTPAFSASTTPAFGSTSTSLFGASSTPAFGSTAFGTSSTGFGTSGTTAFGVSST
TPGFGSSSTPSFGTSASAFGFGSSPSFGQTTVSSGSTPFGTTPSPFGAPAPAFGSQTAAP
AFGQPQFANQAGGTRIKPYSQTPDVDSATSGTQPAAKLDSISAMPEYKDKSHEELRWEDY
QRGDKGGPNTSGTPAVAPSFPSSMPQNAFVSTSNPNPFNQPATNPFSTNNLFAPKPASTI
TSPFSTSSFNNVSVASSSPFTSSSSTTMFGQTGVSTFPANNSPSLFGNTNPAPSTSSLFG
TSMTNNSSPFGTGSSLANTRSAPLFSSAFAQQTSSTPAFSSGSLFGSTNPGGLFSSSGPS
LFPTSTFQPSPPAQTSNIFSFQPAIQPAASTGGFPGFSNTTNQALMGQPTPSQSSMVMQP
APVSNPFGTLPAMPQMSIGNGGSSPSVQYGISSLPVAEKPLPSRSLSMAVPRHLSQRRIK
LLPRKYNPISDSKVPFFAADEESPATLKADAFFIPRENPRNLVIRPIEQWPSRRETDRQS
TLKNATDLNKYKDVSTESERGKSAMSPSIRPPAVENDNQHEARAMVQHGNGNVTSVERLL
PKLPRADYFTEPSIEEIAAKERAEAGYCGRVRDFVVGRHGYGSIKFLGETDVRCLDLESI
VEFNNREVIVYKDDNKKPPVGEGLNKAAEVTLLNIKCVNKKTGEQYYEGARVERYREMLV
KKAEEQGAEFVSFDAAKGEWKFRVKHFSAYGLW
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctccaccaacccattcgggcagtcgtccacgagcccatttggccagacctca
tttggaactccgcagggattcggccagtcttccactgctgccaacaatccctttgcccca
aaaccgtttggcagcccaacgacaacttttggggcacagactggaagctcgctctttgca
actacatccactggtgcctttggccagcagcaatccactcccgcatttggcacaacatct
actggtgcctttggcctgcagcaatccactcccacatttggcaccccatcctcctctccg
tttgggagctccacaccagcctttggtgcgtcccccactcctgcctttggtgccacatcc
tctggatctttgttcggacagaagccaagttttgggggttttgggtcatctcatagccag
tcaagtccttttggtagcacgttccagcaaacacaaccaacatttggcagcagcactttt
ggttcatcaactacgccggcgtttggtaccacgactacgcctgcatttggcacaactacg
ccagcctttggcaccacaactacacctgccttcagtgcatcgactaccccagcatttggt
tcaacatcaacatctttatttggtgcttctagcacaccagcatttggttctacagccttt
ggtacatcttctactggttttggaacttcagggactacagcatttggtgtaagtagtact
actccaggttttggatcttcaagcacaccttcatttggcacatcagctagcgcattcggt
tttggttcttcaccatcttttggacaaacaacagtttcctctggtagcactccctttgga
acaactccgtcaccttttggtgcaccagctcctgcatttggctcacagacagcagcgcca
gcttttggacaaccacaatttgctaaccaagctggaggaaccagaataaaaccttattct
caaacaccagatgttgacagtgctactagtggtactcagcctgctgcaaaacttgattcc
atatcagcaatgcctgaatacaaagacaagagtcatgaagaattgaggtgggaagactac
cagcgtggagacaagggtggaccaaacacttctggaactccagcagtggcacctagcttt
ccatcatcaatgccacagaatgcttttgtttcgacaagcaatcccaatccatttaaccag
cctgccacaaacccattttcaacaaacaatctatttgctcctaagcctgcttcaactatt
acttcaccattcagcacctcatcatttaacaatgtatcagttgcaagttcgagcccattc
acatcatccagtagtaccacaatgtttgggcaaacaggtgtttctacatttccagcaaat
aattcgccatcattatttggaaataccaatcctgctccttctacatcgtcattatttggc
acatcaatgacgaataattcaagtccattcggcactggctcatcgttggctaacactcgg
tcagccccactattttcatcagcatttgctcaacagacatcaagtacaccggctttctcc
tctgggagcctatttgggtcaactaatcctggtggtctgtttagcagtagcggtccttca
ctttttccaacatcaacatttcagccatctccccctgctcaaacttctaacatattctcc
ttccaacctgcaattcaaccagcagcttctacaggtggattccctggtttttccaacact
acgaatcaggccttgatgggacagccaactcctagccagtccagtatggtcatgcagcct
gctcctgtttcaaatccatttgggacgcttccagcaatgcctcagatgtccattgggaat
ggtggatcttcaccttcagttcaatatggaatatcaagtttgccggttgctgagaagcct
cttccaagtagatcattgtccatggcggttcctaggcatttgtcacagagaaggataaaa
ctgctcccgagaaaatataatccaatatctgatagcaaggttccattctttgctgctgat
gaagaatctccagcaacactgaaggcggatgcttttttcatccctagagagaacccaagg
aatctggtaattcgtccaattgagcagtggccttcgcggagagaaactgaccggcaatcg
actttgaagaatgccactgatttgaacaaatataaagatgtttccactgaaagtgagcgt
ggtaagtctgccatgtcaccaagcatcaggcctcctgcagtggaaaatgacaatcagcat
gaggccagggccatggttcagcatgggaatggaaatgttacttcagtcgagaggttgttg
cctaagcttccacgtgcagattacttcacagagcctagtatagaggagattgcggccaaa
gaacgtgcggaggcaggctactgtggccgggtgagggactttgtcgtggggcgacatggc
tacggtagcatcaagtttctgggggagacggacgtgaggtgcctggatctggagtcaatc
gtggagttcaacaaccgggaggtgattgtgtacaaggacgacaacaagaagccccctgtg
ggtgaggggctgaacaaggccgcggaggtgactctactgaacatcaagtgtgtaaacaag
aagaccggggagcagtactacgagggggcaagggtggagaggtacagggagatgctggtg
aagaaggcggaggagcagggtgcagagtttgtgtccttcgatgctgccaagggagaatgg
aagttcagggtaaagcacttcagcgcctatgggctttggtga
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