Miscanthus floridulus: 136520947
Help
Entry
136520947 CDS
T10264
Name
(RefSeq) probable galacturonosyltransferase 3 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
mflo Miscanthus floridulus
Pathway
mflo00520
Amino sugar and nucleotide sugar metabolism
mflo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
136520947
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
mflo01003
]
136520947
Enzymes [BR:
mflo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
136520947
Glycosyltransferases [BR:
mflo01003
]
Polysaccharide
Structural polysaccharide
136520947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
DUF5562
AAA_32
Motif
Other DBs
NCBI-GeneID:
136520947
NCBI-ProteinID:
XP_066370736
LinkDB
All DBs
Position
18:complement(135205907..135220696)
Genome browser
AA seq
698 aa
AA seq
DB search
MASSSSSASSAAAAAAYPRTTLRLRRRPGLLALLLILLCFLSFQVVIHVPATRSAVSQWL
FSGHRADHGTRENCPGCSKLQDVDKAEKTIAYTDQHGRIKLFKITAREFGSSSIWENPWL
PRDSQPVAGTLRQQEAARDRLLASGSETTNLSSTETLATTNVDPIKLRRQVFRRTRKERR
VQELLQMDKKVELDMRNAAINSSSNFNNKVRGSYNIWRPEFRFINTDSTLRLMKDQIIMA
KLYATLALSQKEPDMYALLMKCIKESQTAIGDALIDSELDSSALERAKAMGHVLSSARDV
LYSSGEVSRKLRVMLQSTELNIDAVKKQNSFLVQHAAKTVPIPLHCLHMQLTTDYYFRDD
VTKEHFDDDALKAEQYKEKLEDRSLYHYAIFSDNVLAASVVVRSTVTNANEPEKHVFHIV
TDRLNFAAMKMWFITHPPQLATVHVENMDNFKWLNSSYCSVLRQLESARLKEYYFKAHNP
SSLSDGNENLKYRNPKYLSMLNHLRFYMPEIHPKLEKILFLDDDVVVQKDLTSLWDIDLK
GMVNGAVETCKESFHRFDTYLNFSHPKISENFDPHACGWAFGMNMFDLKEWKKRNITGIY
HYWQDLNEDRKLWKLGTLPPGLITFYNLTYPLNRTWHVLGLGYDPAVDIAEIDNAAVVHY
NGNYKPWLDLAISKYKTYWSKYVDVDNSHVQHCYEGKQ
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctcctcctcctccgcctcgtcggcggcggccgcggcagcgtatcccagaacc
acgctccgattgcggcggcgcccgggcctgctagccctcctcctcatcctcctctgcttc
ctctccttccaggtcgtgatccatgtgcctgccaccagatcagcggtgtcgcagtggctc
ttctcgggtcaccgagccgaccatgggactcgcgagaactgccctggctgcagcaagtta
caggatgtggacaaagctgaaaagacgattgcgtacactgaccagcatggccggatcaag
ctgttcaaaatcaccgccagagaattcggttcgtcctctatctgggagaacccttggttg
cccagagatagccagccggtagccggaacattgcgccagcaagaggctgccagggatcgt
ctactcgccagtggatcagaaaccaccaatctttcaagtactgaaactctggctactaca
aatgtcgatccgattaaattaaggcgacaggtatttcgacgcacaagaaaggagcggagg
gttcaggagctgcttcagatggataagaaggttgaacttgacatgaggaatgcagcaata
aatagctcaagcaactttaataataaagttagaggcagctacaacatatggaggccggag
ttccgctttattaatacagattcaacactaaggctcatgaaagatcagataataatggcc
aagttatatgccactcttgcactctcccagaaggaaccagacatgtatgccttgctcatg
aagtgcataaaagaaagccaaacagctatcggggatgcacttattgacagtgaactcgat
tctagtgccttagagagagcaaaagcaatggggcatgtgctgtcttcggctagagatgtt
ctgtacagctcgggtgaagtgtcaagaaaattgcgtgttatgttgcagtcaacggaacta
aatatcgatgcagtaaagaaacagaactcatttctggttcagcatgctgcgaagactgtc
cccattcccttgcactgtctacatatgcagctgacaactgattattattttcgtgatgat
gtgaccaaggagcattttgatgatgatgctttgaaggcggaacaatataaagaaaagctt
gaggaccggtcactctatcactatgctatattttctgataacgtgcttgcagcctcagta
gttgtcagatcaactgtgacaaatgccaatgaaccagagaagcacgtgttccacattgtc
actgatagacttaattttgcagccatgaagatgtggttcattactcatcctcctcaactg
gcaactgttcatgtggagaacatggacaatttcaaatggcttaattcgtcatactgttct
gttcttcggcaactggagtcagctcgcctcaaagaatattacttcaaagcacacaatcca
tcatcactctctgatggaaacgagaatctgaaatacaggaacccaaaatatctgtccatg
ctcaaccatttgagattctacatgccagaaattcacccaaagcttgagaagatactgttt
cttgatgatgatgttgttgtacagaaggatttgacatccctttgggatattgatcttaaa
gggatggtaaatggcgctgtggaaacctgtaaagagagtttccatcgctttgatacttat
ctcaacttctcacacccaaagatctcagagaactttgatccacatgcttgtgggtgggct
ttcggaatgaacatgtttgacctcaaggagtggaagaagcgaaatatcactggaatatac
cattattggcaagatttgaatgaggatcgtaagctgtggaagctgggtacattgcctcca
ggtttaattactttctacaacctgacatacccgttgaatcgtacttggcatgtcttgggc
ctgggctatgatccagctgttgacattgctgagattgataatgctgcagtagttcattac
aatgggaattataagccctggcttgaccttgccatttccaagtacaagacatactggtcc
aagtatgtagatgttgacaactcgcatgttcagcattgctacgaaggcaaacaatga
DBGET
integrated database retrieval system
