Miscanthus floridulus: 136521051
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Entry
136521051 CDS
T10264
Name
(RefSeq) protein CHROMATIN REMODELING 20-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mflo03000
]
136521051
03036 Chromosome and associated proteins [BR:
mflo03036
]
136521051
Transcription factors [BR:
mflo03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
136521051
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
136521051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
136521051
NCBI-ProteinID:
XP_066370867
LinkDB
All DBs
Position
2:31134583..31149606
Genome browser
AA seq
1481 aa
AA seq
DB search
MNKDGILSDDKMARMESFQPNGQLVDIIIIDSQSDENKIGVETSIRDSSLKEHKEPPCTT
MDNNANEETSITDDDSEADSYEFSLRESDNEQASASEEGTEVPLTEEEVEELVAEFLEVE
SKAAQAQESLEKESLDKIETEVRLELSERLQGDELESAVSTEMDQFQMQWENELDDLEIR
SSILLEQLDAAGIELPRLYKSIESQVPNVCETEAWKSRTHWAGSQVPEEANRSIKNADEY
LQSCRPVRRKHGRLLEEGASGFLAGKVPVGDDDSVKCHEKSWSSFNELIKSKENAENTFG
SSNWASVYLASTPQEAAALGLQFPGVDEVEEISEVDGVFDDIKGVDEVELSEEQRRKYRK
VTEEDDAKIMKCLQRRSKGKRMRGWCKENIGLVSSCDEKPLPENGVLGAKSDLPSSKKLK
TDENKVSIETLKHTFEDDENEKRLKTVIIESDDDMQIDNKRALQKDGEGSSAEVEKVVDI
IDLDLFPSQSPKLPTKSLPKTFKCTICSEMLNASDVHRHPVLDVVVCGSCRFLVIEKNRL
EDPVSGGYCTWCAQSELLQSCSSCKLLFCTNCLSKNLGEECLSEAKATGWQCCCCIPSQL
ELLISECDKALSGVESSDSESSNTELSGPENNGPVSKRRMKKSIRRIMDDTELAEETKRK
IAMEKARQDHLKSMQEQSATKLRSENVGTPFEVPVEICLQDAGDGLIVNLAREEDEELVR
IPSSMSSKLKPHQVEGIRFIWENVIQSVKKVKSGDKGLGCILAHNMGLGKTFQVITFLYT
IMRHAQLGLRTALVVTPVNVLHNWRKEFSKWRPAELKPLRVFMLEDVARVKRPDLLTKWR
VKGGVLLIGYSSFRNLSLGKHVKDKNSANEIAYALQCGPDILVCDEAHMIKNRRADITQA
LKQVRTQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSTHEFRNRFQNPIENGQHMNSTS
DDVKIMNQRSHILFEQLKGFVQRKSMNVVKNDLPPKKVFVITVKLSELQRKLYKRFLDVH
GFSSSGYSEKSHSSFFAKYQTLAQVWNHPGLLQMAKEQRGNLRREDAVENFMMDDSSSDD
NVENYLPNGEKQKDRADQQSKKSNIVNEESNWWEELLDENTYMEADYSGKMTLLLDILSK
SSELGDKVLVFSQSLTTLDLVEFYLAKLQINGKEGKHWKRGKDWYRLDGSTPSSERQNLV
EMFNDPGNTRVKCTLISTRAGSLGINLHAANRVVLLDGSWNPTHDLQAIYRVWRYGQTKP
VYAYRLMAHRTMEEKIYKRQVTKEGLAARVVDRQQVSRTISKEEMLHLFEFGEEELMEQN
ENGSTIIEKPSTSETIKTSEPVPVDSLMLSLLSEQTRWISGYHEHEALLQENVEEKLTKE
EQDMALSEWESLSKAAPDPERKSNMSAVPTYPNLVRPLKPASRSRQLQQPKVNSNNQKKC
NNLTHLLTLRSNGTKAGCTTTCKECGQEISWETLNRDGRSR
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggatggaatattgtctgatgataagatggcaaggatggaatcttttcaacca
aatggacagctagtagatataataatcattgactctcaaagtgatgaaaataaaattggt
gtggaaactagcataagagacagttccttgaaggagcataaggagcctccatgcacaaca
atggacaataatgcgaatgaagaaacatccattactgatgatgattcagaggccgattca
tatgaattctctctccgagaatcagataatgaacaagcttcagcatccgaggaaggcact
gaggtacctctgactgaggaagaagttgaagaattggttgctgaattcctcgaagtcgag
agcaaagcagctcaagcgcaagagtcacttgaaaaggagtcactggacaaaattgaaact
gaagtaagattggagttatctgagaggcttcaaggagatgagttagaatcagctgtgtca
actgagatggatcaattccagatgcaatgggaaaatgaacttgatgatctagagatccgc
agttctattctgttggaacaacttgatgctgctggaattgaacttcccagactctataag
tcaattgaaagtcaagttccaaatgtttgtgaaactgaagcatggaagagcaggacacat
tgggctggttctcaagtgcctgaagaagctaaccgatccattaaaaatgctgatgaatac
ctccagtcttgcagacctgtacggagaaaacacgggaggttgctggaggaaggtgctagt
ggctttcttgctggaaaagttcctgttggggatgatgattctgttaagtgtcatgagaaa
agttggagctctttcaatgaacttattaaatctaaggagaatgctgagaatacatttggt
agcagtaactgggcatcagtttatcttgcaagcaccccccaggaagcagccgcattaggt
ctccagtttcctggagttgacgaggtagaggagatatcagaagttgatggtgtttttgat
gatataaaaggtgtagatgaagtagagctttctgaggaacagagaaggaaatacagaaag
gttacggaagaggatgatgcaaaaataatgaagtgcctgcagcgtcgttcgaaaggaaaa
aggatgagaggctggtgtaaggagaacattggtttggtctcatcatgtgatgagaaacct
ctaccagaaaatggtgtcttaggtgctaaaagtgaccttccttcatctaaaaaactcaaa
actgatgaaaacaaagtttctattgagacattgaagcatacatttgaagatgatgagaac
gagaagagattgaaaactgtgataatagaaagtgatgatgatatgcagatagataacaaa
cgagctttacaaaaggatggtgaaggtagttcagcagaagtcgaaaaagtggttgatatc
attgatcttgatcttttcccttcacaaagccctaagctccctactaaaagtttgcctaaa
actttcaaatgtactatttgctctgaaatgttgaatgcctctgatgtgcatcgccaccct
gtcttggatgttgttgtttgtggatcatgcagatttcttgtgatagagaagaatcgtctt
gaggatcctgtatctggtggttattgcacttggtgtgcacaaagtgaactgcttcaaagt
tgtagttcttgtaagcttcttttctgtacaaattgcctgtcaaagaatttaggtgaagaa
tgcttatcagaagctaaagccactggttggcagtgttgctgctgcatacccagtcaactg
gaacttttaatttctgaatgtgacaaggccctcagtggtgtggaatcttctgattcagag
agtagcaacacagagctttctggaccagagaataatggtcctgttagcaagcgaagaatg
aagaagagtattagaagaattatggatgatacagaacttgctgaggaaacaaagcgtaaa
attgcaatggagaaggcaaggcaagaccatttgaagtccatgcaagagcaatctgccacc
aagttaaggagcgagaatgttggaactccctttgaagttccagtggaaatctgtttacag
gatgctggtgatggacttatagtcaaccttgccagggaggaggatgaggaacttgttagg
attccaagcagcatgtcttctaaactgaaacctcatcaggtagaaggaataaggtttata
tgggaaaatgttattcaatctgttaaaaaggtcaaatccggggataaaggtcttgggtgc
attttggcgcataacatgggccttgggaaaacctttcaggttattacattcctctatact
attatgagacatgctcaattgggattgcgcacagcacttgttgtcacccctgtcaatgtt
cttcataactggaggaaagagtttagcaagtggcgtccagcagagctgaaacctcttcgt
gtttttatgttggaagatgttgcaagggtgaaaaggccagatttactaaccaaatggcga
gtgaagggtggagtgcttctcattggttattcatcatttaggaacttatcccttggaaag
catgtgaaggacaaaaattctgcaaacgaaattgcttatgctttgcagtgtgggccagat
attcttgtatgtgatgaagcacatatgataaagaataggagggccgacattacgcaggct
ctgaaacaagtaagaacacagagaagaattgctttaactggatctccgttgcagaataat
ttgatggaatattattgtatggttgattttgtcagggaaggttttcttgggagtactcat
gaattccgaaacaggttccagaaccccattgaaaatgggcaacacatgaattcaacatca
gatgatgtcaagatcatgaaccaacgatcacacatcttgtttgaacaactgaaaggtttt
gtccagcggaagagcatgaatgttgtgaagaatgatctaccaccaaagaaggtttttgtt
attactgtaaagctatctgagctacagaggaagctatacaaaaggttcttagatgttcat
ggtttctcaagtagtggttattcagaaaaatctcacagttccttctttgccaagtaccaa
acattagcccaggtatggaatcatccggggctcctccagatggctaaagaacagagagga
aatttgcgtcgtgaagacgctgttgagaattttatgatggatgacagttcaagcgatgat
aatgttgaaaattacttgcctaatggagagaagcagaaggatagagctgatcagcagtcc
aagaaaagcaacattgtgaatgaggaaagtaactggtgggaggaacttttagatgagaat
acttatatggaagcagattacagtggcaaaatgaccttgctccttgatatcctgtcaaaa
agttctgaattaggcgacaaagtattagtttttagccagagtttgaccactctggattta
gtggagttttatctggcaaaactgcaaatcaatggaaaagaaggcaaacattggaagcga
gggaaggattggtacaggcttgatgggagcactccatcttctgaacggcagaatcttgtg
gagatgtttaatgaccctggaaacacaagagtgaaatgcacgttgatatcaactcgtgct
ggatccctgggtatcaaccttcatgctgcaaatcgcgtggttcttctggatggatcatgg
aatccaacacatgatctgcaagccatttatcgggtttggaggtatggccagaccaaacct
gtatatgcctaccgcctaatggcacatcgaacaatggaagagaaaatatataaacgccag
gtgacaaaagaaggccttgcagcaagggtggtggatagacagcaagtttcaagaaccatc
tccaaagaagagatgctgcatctttttgaatttggcgaagaggaattaatggaacagaat
gagaatggttctaccataattgagaagccatccacttctgaaactattaaaacctctgag
cctgtacctgtcgacagtctcatgctgagcctactcagtgagcaaactcggtggatttca
ggttaccatgaacatgaagctctcctccaagaaaatgtagaggaaaagcttacaaaggag
gagcaggatatggctttgtcagagtgggagtcattgagcaaagctgcacctgatcccgag
agaaaatcaaacatgagcgcagttccaacgtatcctaatcttgtgcggccacttaagcct
gcttcaagaagccggcaactgcagcaacctaaggttaactcaaataatcaaaagaagtgc
aacaacttaacccacttgctgactctaagaagtaatggcacgaaagcagggtgcacgaca
acctgtaaggagtgtggccaggagattagttgggagactctaaacagagatggtaggtcg
agatga
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integrated database retrieval system
