Miscanthus floridulus: 136521183
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Entry
136521183 CDS
T10264
Name
(RefSeq) pre-mRNA splicing factor SR-like 1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
mflo Miscanthus floridulus
Pathway
mflo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136521183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mflo03041
]
136521183
Spliceosome [BR:
mflo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
136521183
Complex C
U4/U6.U5 tri-SnRNP related factors
136521183
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Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
136521183
NCBI-ProteinID:
XP_066370984
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All DBs
Position
18:complement(19737729..19741928)
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AA seq
392 aa
AA seq
DB search
MEIQSSGRPIEGLMEKVLSVNILSSDYFKELFKYKTYHEVVDEIYNQVDHVEPWMTGNCR
GPSSAFCLLYKFFTMKLTVNQMHGLLKHQDSPYIRAIGFLYLRYVAEPKTLWTWYEPYIK
DDEEFAPGSNGKLTTMGVYVRDLLLGQYYFDSLLPRVPLPILRQVTNHLEKLKLPIKQSG
MTGDSNRLESNDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSKQDKERSYDG
DHAKSPPRKHRTRSSERDHDSERDRSDRDRGRYKDREHDRYARDHRDQDHHLQSYSDRDD
ERRGREKRDWDSDRNRHSSSRRSRSRSPVRGRADGDKHRSSPFGRAPESSNLAKLKDLYG
DATNTKNDAGDDRAHRDSGTEEVIRLGGARWR
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggagatccagtcgtctggccgtcccatcgaggggctgatggagaaggtgctgtccgtg
aacatcctctcctcggactacttcaaggagctcttcaagtacaagacctaccacgaggtg
gtcgacgagatctacaaccaggtggaccacgtcgagccctggatgaccggcaactgccgc
gggccctcctccgccttctgcctcctctacaagtttttcacaatgaagctcaccgtcaat
cagatgcacgggctgctcaagcaccaggactccccttacatcagagctattggattcctc
tacctgcgatatgttgcagaaccgaagacactgtggacttggtatgaaccctatatcaag
gatgacgaggagtttgcccccggctcaaatggtaaattgactacaatgggcgtttatgtg
cgtgatctcctccttggtcagtactatttcgacagtcttcttccgcgagtgcccctccca
attctccgacaggtcactaaccatcttgagaagttgaagcttccaataaagcagtcagga
atgactggggattccaataggcttgaatcaaatgatactgccagaaggcctccttccgta
aaggcttctttgtctgtctcttttggtcagcgtgctccacaccgtgcatcgacaagggat
tcttccccagtccgaagaacattaccttccaaacaggacaaggaaagaagttatgatggt
gaccatgcaaaatcgccaccaaggaagcacagaactcggagctctgagcgtgatcatgac
tctgagagggatcgttcagatcgtgatcgtggcaggtacaaggatagggagcatgatcgt
tatgctcgtgatcacagagaccaggatcatcatctccagagttattcagatagggatgac
gaaaggcgaggccgtgaaaagagggactgggattctgaccgaaataggcattcaagctcc
cgcaggagcaggagcaggagtccagtccgtggcagagctgacggtgacaaacatcgctcc
agcccatttggtagggcaccagaatcatccaacctggcaaagctaaaggatttatacggt
gatgcaacaaacacaaagaatgatgctggcgatgatagagctcacagggattctggaacg
gaagaggtaatccgactgggaggggcaaggtggaggtga
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