Miscanthus floridulus: 136521208
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Entry
136521208 CDS
T10264
Name
(RefSeq) DNA polymerase lambda-like isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
mflo Miscanthus floridulus
Pathway
mflo03410
Base excision repair
mflo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
136521208
03450 Non-homologous end-joining
136521208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136521208
Enzymes [BR:
mflo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
136521208
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
136521208
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
136521208
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
BRCT_2
NTP_transf_2
HHH_5
IMS_HHH_1
PvlArgDC
Motif
Other DBs
NCBI-GeneID:
136521208
NCBI-ProteinID:
XP_066371014
LinkDB
All DBs
Position
18:complement(43871835..43876367)
Genome browser
AA seq
552 aa
AA seq
DB search
MAPKRKPAVAAERDPDGIFRSVSAFIVPHGVQARRLEVWKQRLVQMGGRVVEKPTKGELA
GVNHVLAMDAKALLREFDAAWLHRFSGSVVSFEWMEECLKSGERLPNHKFAINYEEELKP
KNAAGTGNLDAPQPAKRTKMSSEYPGDCQRISGGDRESELAAGGSPGASAHVVEGSSAGK
KPNQYASSQSSSADSKDTIGSHGTFDIEEASSGGPSIYAPADLNRNITKIFGRLIDIYRA
LGDDRRSFSYYKAIPVIEKLPFKIESADQVKGLPTIGKSLKDHINEIVTAGKLSKLEHFE
NDEKVRTISLFGEVWGVGPATALKLYEKGHRTLDDLRKDESLTNAQRIGLKFFDDIKQRI
PRHEVSEMEKLLKDVGTDILPGVIIVCGGSYRRGKASCGDMDIIITHPDGESHVGFLSKF
VQRLKEINFLREDLIFSIHSVDGSDSGVDTYFGLCTYPGRELRHRIDLKVYPRNRYACGL
LAWTGNDVLNRRLRLLADSKGYVLDDTGLYLATRGSGGKHAGRSDAIVNCDTEKDVFETL
GFPWLEPHERNL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgaagcggaagcccgccgtagcggcggagcgggaccccgacggcatattccgc
agcgtctccgctttcatcgttccccacggcgtccaggctcgccgcctcgaggtgtggaag
cagaggctggtgcagatggggggccgagtcgtggagaagcccaccaagggcgagctggcg
ggggtcaaccacgtgttggccatggacgccaaggcgctactccgggagttcgacgccgcc
tggctccaccgcttcagcgggagcgtggtgtccttcgaatggatggaggagtgcctcaag
tccggggagaggctgcccaaccacaagtttgcaatcaattacgaagaggaattaaagcca
aagaatgcggctggcactggaaatttagatgcgccacagcccgctaaaaggaccaaaatg
tcatctgagtatcctggggactgccagagaattagtggaggggatagggagagcgaacta
gcagctggagggtctcctggtgcaagtgcacatgtggttgaaggatcaagtgctggaaag
aagcctaaccagtatgcaagtagccaaagtagctcagcagattccaaggataccataggt
tctcatggtacatttgacatagaggaagcctcttctggaggacccagcatatatgctcca
gcagatttgaacaggaacatcaccaaaattttcggaaggcttatcgatatctatagggcc
ctgggagatgacagaagatcatttagctattacaaggccataccggtgattgagaaattg
ccattcaaaatcgaaagtgctgaccaagtcaaaggtctccctactattgggaaatctttg
aaagaccatataaatgaaatagtcaccgctggaaaactctccaagctggaacactttgag
aatgatgaaaaggtaaggaccatcagtttatttggtgaagtttggggagttggtcctgca
actgcgctcaagttatacgaaaagggacaccgtactcttgatgatctacgcaaagatgaa
tcacttacaaatgcgcagaggattggattgaagttttttgatgatatcaagcaaagaata
ccccgacatgaagttagcgagatggagaagcttttaaaagatgttgggactgatatcttg
cctggggtaataattgtttgtggaggatcatatagacgtggtaaagcatcttgtggtgac
atggatattattataactcatcctgatggagaaagccatgtaggatttttatccaagttt
gttcaacggttgaaggaaattaactttttgagggaggatcttatctttagcatacacagt
gttgatggatctgatagtggggtcgacacatactttggtctttgcacataccctgggcgt
gagctgcggcaccgtatcgacttaaaggtatacccgaggaacagatatgcatgtggtctg
cttgcatggactggaaatgatgtactaaatcggcgattaaggctactagcagattctaaa
ggatatgtacttgacgatactggattatatctagctacacgcggcagtggtggaaagcat
gctggcagatcggacgccatagttaactgtgacaccgagaaggatgtgttcgagacactt
ggattcccttggctggaaccccatgagcgcaacctttag
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