Miscanthus floridulus: 136521486
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Entry
136521486 CDS
T10264
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mflo Miscanthus floridulus
Pathway
mflo00040
Pentose and glucuronate interconversions
mflo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
136521486
Enzymes [BR:
mflo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
136521486
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
136521486
NCBI-ProteinID:
XP_066371331
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All DBs
Position
18:88368044..88370112
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AA seq
449 aa
AA seq
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MEEGFRWSRPGSFVLYFVFFLSAAVSSEANIGDFDDYWRQRKLMADAAAETTYKHDPLEV
TNQLNRAVHRSVEKEDMSTRREMMGQKKGKLNGPCTATNPIDRCWRCRQDWATDRKRLAR
CAKGFGRNTTGGLAGKFYVVTDGTDDDVVNPRPGTLRWAVIQIEPLWITFAKTMIITLKE
ELIIRGDKTIDGRGAQVRIANGAQLTVQFSNNVIIHNIHINDIMSSNKNGGNIRDSPDHF
GWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHMTNHNDVMLFS
SSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSKAPTII
SQGNRYIAPPNLAAKLVTKHHDAPESEWKNWVWHSENDLFMEGANFTVSGGQINRQFHKK
DLIKPKPGSYVTRLTRYAGSLACRPGKPC
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggggttccgatggagcagaccgggctctttcgtcctgtacttcgtgttcttc
ctgtccgcggccgtgtcgtcggaggccaacatcggcgacttcgacgactactggcggcag
cgcaagctcatggccgatgccgcggcggagaccacgtacaagcatgacccgctcgaggtc
accaaccaactcaaccgcgcagtccacagatccgtggagaaggaggacatgagcacgagg
cgggagatgatggggcagaagaagggtaagctcaacgggccgtgcacggcgacgaacccg
atcgaccggtgctggcggtgccggcaggactgggcgacggaccggaagcggctggcgcgg
tgcgccaaggggttcgggcgcaacaccacaggcgggctggccggcaagttctatgtggtg
acggacggcaccgacgacgacgtggtgaacccgcggcccggcacgctccgttgggccgtc
atccagatcgagccgctgtggatcaccttcgccaagacgatgatcatcacgctcaaggag
gagctcatcatccgcggcgacaagaccatcgacggccgcggcgcgcaggtgcgcatcgcc
aacggcgcgcagttgacggtgcagttctccaacaacgtcatcatccacaacatccacatc
aacgacatcatgtcctccaacaagaacggcggcaacatcagggactcgccggaccacttc
ggctggcgcaccgtctccgacggcgacggcatcaccgtcttcgggtccaccaacgtgtgg
ctggaccacctctccctgtccaactgccaggacgggctcatcgacgtcatcgccaagtcc
acgggcgtcaccatctccaactgccacatgaccaaccacaacgacgtcatgctcttcagc
tccagcgacaagcatcccgaggaccagatcatgcagatcaccgtcgccttcaaccacttc
ggcagaggcctcgtgcagagaatgccaaggtgccgttggggattcttccacgtggtgaac
aacgactacacgcactggctcatgtacgccatcggcggcagcaaggccccgaccatcatc
agccagggcaaccgctacatcgcgccgccgaaccttgcggcgaagctggtcaccaagcac
catgacgcgccggagtcggagtggaagaactgggtgtggcactcggagaacgatctcttc
atggagggcgccaacttcaccgtcagcggcggccagatcaacaggcagttccacaagaag
gacctcatcaagcccaagcccgggtcctacgtcaccaggctcacgcgatacgccggctcc
ctcgcctgcaggcccggcaagccctgctag
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