Miscanthus floridulus: 136521697
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Entry
136521697 CDS
T10264
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
mflo Miscanthus floridulus
Pathway
mflo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
136521697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mflo03009
]
136521697
Ribosome biogenesis [BR:
mflo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
136521697
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_Vps41
DUF5845
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
136521697
NCBI-ProteinID:
XP_066371548
LinkDB
All DBs
Position
18:complement(128754562..128758284)
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AA seq
557 aa
AA seq
DB search
MSLISQNAVQKRRLRKNEADDGNDEDIGSPTSIDAEVGKEVKLKNHNKERKKKRTKMLES
QQNKEEEEMRQLESSLFGSLYAPLEFGTEVGAAVVAPDQDAPLFFTDRSAGGGVDHFPIY
EEDMAHEDEEDVVGVKGRRPVWVDEEEERTEVDIVKVSRLRKLRKEEDEHLISGKEYEAR
LRGQHAKLNPFTGWADMDRKTSLPVASDGESDDEGCVDDILQNNDELVVKDTVKLLPGML
EFSRLVDANIQDPSSGPINSVQFHRNGQLMLAAGLDKHLRFFQIDGKRNPKIQSIFIGDC
PVHKASFLPDGSEVILSGRRKFFYSFDLVNAAVSKIGPLTGREEKSLESFEISPDSRTIA
FVGNEGYILLISAKTKQLIGTLKMNGSVHSLAFADAGNQLLSSGGDGHVYHWDLGTRKCI
HKAFDDGSLAGISLCTSQDSSLFATGSTSGIVNVYKRDDFLGGKRKPLKTIENLTTDIGE
MKFNHDAQILAISSRKERNGMRLVHIPSFSVFQNWPGPRFSLHYPRCLDFSPGSGFLSVG
HAGGKVLLYKIHHYKNA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgatatcccagaacgcggtccagaagcgccgcctcaggaaaaatgaagctgat
gatggcaatgatgaggacattggctctccgacctccatagatgcagaggttggaaaggaa
gtaaagttgaagaatcacaataaggaaaggaagaagaaaaggactaagatgctggaatcc
cagcagaacaaagaggaagaggagatgcggcagctggagagctcattgtttggttccctt
tatgcgccactggagtttggcactgaggtaggcgctgcagtagtagctcctgaccaggat
gcgcctttgtttttcacagatagatccgctggtggtggcgtggatcattttcctatatat
gaggaggatatggcccatgaggatgaggaagacgtggtgggtgtcaaggggaggaggcct
gtatgggtggatgaggaggaagaaaggacagaagtggacatcgtgaaggtttcaaggttg
aggaagctaagaaaagaggaagatgagcatttgatttcagggaaagagtatgaggccagg
ctgcgtggtcagcatgccaaattgaaccccttcactggctgggctgatatggaccggaaa
acttctcttcctgtcgcatcagatggtgagtctgatgatgagggttgtgtcgatgatatc
cttcagaataacgatgagcttgttgtcaaggatactgtcaagctcttacctgggatgctg
gagttctcaaggctcgttgatgccaatatccaggatccatcaagtggtcctatcaattca
gtgcagtttcataggaatgggcaactgatgcttgctgcaggtttggacaagcatctcagg
tttttccagattgatggaaagagaaaccccaagatccagagcatatttattggggactgt
ccagtacacaaggcctcatttctacctgatggctctgaggtgatcctatcaggaaggaga
aagttcttctactcatttgacctggtgaatgctgctgttagcaagattggacctttgaca
gggcgtgaggagaaaagcctggagagctttgagatatcccctgattcgagaaccattgct
tttgttggtaatgaagggtacatccttcttatttctgccaagacaaagcagctcattgga
accctcaagatgaatggaagcgtgcattcactggcttttgcggatgctggaaaccagctg
ctgagcagcggtggagatggccatgtttaccactgggatctcggaacaaggaagtgcatc
cacaaggcttttgacgacggttccctcgctggcatttcgctttgcacctcgcaggacagc
tctttgtttgccacaggctccaccagcggcatcgtgaatgtgtacaagagggatgatttt
cttggcgggaagaggaagccacttaagacgattgaaaacctgaccactgacattggcgaa
atgaaattcaaccatgatgcccagatcttggcgatcagctcaaggaaagagaggaatggg
atgaggcttgtgcacatcccgtcgttcagcgtgttccagaactggccagggcctcggttc
agccttcactatccacggtgcctggatttcagccctggcagtgggttcttgtctgtcgga
catgcgggtggaaaagtcctgctatacaagattcaccactataaaaacgcatga
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