Miscanthus floridulus: 136521877
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Entry
136521877 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mflo04131
]
136521877
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mflo04812
]
136521877
Enzymes [BR:
mflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
136521877
Membrane trafficking [BR:
mflo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
136521877
Cytoskeleton proteins [BR:
mflo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
136521877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
NPHP3_N
AAA_16
Vps4_C
AAA_22
TIP49
AAA_14
Mg_chelatase
AAA_2
DUF815
IstB_IS21
AAA_25
RNA_helicase
nSTAND3
Guanylate_kin
TniB
AAA_24
DUF4368
Motif
Other DBs
NCBI-GeneID:
136521877
NCBI-ProteinID:
XP_066371745
LinkDB
All DBs
Position
18:13387183..13392937
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AA seq
490 aa
AA seq
DB search
MSFLRSLADSFSSLLFSSGGGGAPMDAAGAAPSPAAVVGERVAVKLRGYFDLAKEEIDKA
VRAEEWGLPDDATAHYRNAMRVMLEAKAARVPDAVSSSERGQVRVYQEKIAKWQAQVEER
LRVIGQRSGEGATAAVVPKKVAASNPIGRTARTAPNSIQRSPLQNSPTFNRGGQASGHQK
IGSGASRPVQKAGGSYDDKLVEMINTTIVDRSPAVKWDDVAGLDKAKQALMEMVILPTKR
RDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVR
TLFMVAIDRQPSVIFMDEIDSIMSTRLANENDSSRRLKSEFLIQFDGVSSNPDDLVIVIG
ATNKPQELDDAVLRRLVKRIYVPLPDPNVRKLLLKNQLKGQAFKLSNYDFERLAVETEGY
SGSDLRALCEEAAMMPIRELGPQNILTIKANQLRPLRYEDFKNSMTVIRPSLQKSKWDEL
EKWNEEFGSS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcctccgctcgctagcggactccttctcttcgctgctcttctcgtcggggggc
gggggagcgcccatggacgcggctggggctgcgccgtcgccggcggcggtggtgggggag
cgcgtggcggtgaagctcaggggctacttcgacctcgccaaggaggagatcgacaaggcc
gtgcgcgccgaggagtgggggctccccgacgacgccaccgcgcactaccgcaacgcgatg
cgcgtcatgctcgaggccaaggccgcgcgcgtccccgacgccgtctcctccagcgagagg
gggcaggtcagggtgtaccaggagaagatcgccaagtggcaggcgcaggtcgaggagcgg
ctcagagtgattgggcagagaagtggtgaaggggccactgctgcagtagtgcctaagaag
gttgctgcaagcaatcctattggtaggactgcaagaacagcgccaaatagcatccaaaga
tctcctttgcaaaatagtcctaccttcaacagaggtggccaagcatctggacatcagaag
ataggaagtggagcttccagacctgttcaaaaggctggtggaagctatgatgacaagctt
gttgaaatgattaatacaacaattgtggatagaagccctgctgttaaatgggatgacgtt
gctggtcttgacaaggcaaagcaagcactcatggaaatggttattttgcctactaaacga
agggatttgttcaccggacttcggagacctgctaggggtttgcttctctttggtccacct
gggaatggaaaaacaatgcttgccaaagctgttgcatcagaatctgaagcaacatttttt
aatgtttcggcttcttcgttgacatcaaagtgggtaggagaagctgaaaaacttgtcagg
acacttttcatggttgcaattgatagacaaccatctgttatttttatggacgagattgat
agtatcatgtctacaaggttggctaatgagaatgactctagcaggcgactgaaatctgaa
ttccttatccaatttgatggggtatcctcaaacccagatgatttagtaattgttataggg
gctactaataaacctcaagagttggatgatgctgttcttcgaagactggtaaaaagaata
tatgtgccactacctgatccaaatgtacggaagctacttctgaaaaatcagctcaaagga
caagcattcaaattgtcgaactatgatttcgaaagacttgctgtggagactgaaggatat
tctggaagtgatctgagagccttgtgcgaagaagctgcaatgatgccaataagagagctt
ggtccacagaatattcttactattaaagcaaatcagttgcgacctttgaggtatgaggat
tttaagaactcgatgacggtgatcaggccaagcttgcagaagagcaaatgggacgagctg
gagaaatggaacgaggaattcggttcgagctga
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