KEGG   Miscanthus floridulus: 136522017
Entry
136522017         CDS       T10264                                 
Name
(RefSeq) pectate lyase-like
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
mflo  Miscanthus floridulus
Pathway
mflo00040  Pentose and glucuronate interconversions
mflo01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    136522017
Enzymes [BR:mflo01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     136522017
SSDB
Motif
Pfam: Pectate_lyase_4 Pec_lyase_N Beta_helix
Other DBs
NCBI-GeneID: 136522017
NCBI-ProteinID: XP_066371900
LinkDB
Position
18:complement(17922542..17924205)
AA seq 439 aa
MSMAAVIRSRPLSVLFCVVVLAAVAAAAQASNNNVTSDEEYWAARAEAARSRNRAAYVSD
PVAAMNHFNVEVLRATTRRALARYNGPCMATNPIDRCWRCRADWATDRKRLAQCARGFGH
KTVGGAAGKLYVVRDPSDDEMIIPRKGTLRHAVIQDRPLWIVFARDMVIRLRQELIVSSN
KTIDGRGAQVHIVYAQITLQNVHDVILHNLHIHDAKAHSGGMIRDSKRHYGLRTRSDGDG
ISVLSSSNVWIDHVSMSSCADGLIDVVNGSTAITVSNSHFTRHDHVMLFGASNDNPQDEV
MQITVAFNHFGRGLVQRMPRCRYGFFHVVNNDYTHWIMYAIGGNKNPTIISQGNRFIAPD
DPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNGAFFNESGGQNERKYDKFDFIPAKHGRY
VGQLTRFAGPLKCIVGQPC
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgtcgatggcggccgtaataaggagccgccccctgtccgttctcttctgtgtcgtcgtc
ctcgccgcggttgcagccgcggcgcaggcatccaataataacgtcacctccgacgaggag
tactgggcggcgcgcgccgaggcagcccggtcgcgcaaccgcgccgcctacgtcagcgac
cccgtggccgccatgaaccacttcaacgtggaagtgctgagggcgacgacgcggcgcgcc
ctggcgaggtacaacggcccgtgcatggcgacgaaccccatcgaccggtgctggcgctgc
cgcgccgactgggcgacggaccgaaagcgcctggcgcagtgcgcgcgcgggttcgggcac
aagaccgtcggcggcgcggccgggaagctgtacgtggtgagggacccgagcgacgacgag
atgatcatcccgcggaagggcacgctccggcacgccgtgatccaggaccgcccgctgtgg
atcgtgttcgcgcgcgacatggtgatccggctgcggcaggagctgatcgtgagcagcaac
aagaccatcgacgggcgcggcgcgcaggtgcacatcgtgtacgcgcagatcacgctgcag
aacgtgcacgacgtgatcctccacaacctccacatccacgacgccaaggcgcactcgggc
ggcatgatccgcgactccaagcgccactacggcctgcgcacgcgcagcgacggcgacggc
atctccgtgctctcgtccagcaacgtgtggatcgaccacgtgtccatgtcgtcctgcgcc
gacgggctcatcgacgtcgtgaacgggtccacggccatcaccgtgtccaacagccacttc
acgcgccacgaccacgtgatgctgttcggcgccagcaacgacaacccgcaggacgaggtg
atgcagatcacggtggcgttcaaccacttcggcagggggctggtgcagcggatgccgagg
tgccgctacggcttcttccacgtggtgaacaacgactacacgcactggatcatgtacgcc
atcggcgggaacaagaaccccaccatcatcagccaggggaaccgcttcatcgcccccgac
gaccccaacgccaaggaggtgaccaagcgggagtacacgccgtacaaggactacaaggag
tgggtgtggaagtcgcagggcgacgtcatgatgaacggcgccttcttcaacgagtccggc
ggccagaacgagcgcaagtacgacaagttcgacttcatcccggccaagcacggccgctac
gtcggccagctcacgcgcttcgccggaccactcaagtgcatcgtcggccagccgtgctag

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