Miscanthus floridulus: 136522115
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Entry
136522115 CDS
T10264
Name
(RefSeq) TATA-box-binding protein 2
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mflo Miscanthus floridulus
Pathway
mflo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
136522115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mflo03000
]
136522115
03021 Transcription machinery [BR:
mflo03021
]
136522115
Transcription factors [BR:
mflo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
136522115
Transcription machinery [BR:
mflo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
136522115
RNA polymerase III system
TFIIIB
136522115
RNA polymerase I system
SL1/TIF-1B
136522115
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
136522115
NCBI-ProteinID:
XP_066372003
LinkDB
All DBs
Position
2:38406446..38411784
Genome browser
AA seq
200 aa
AA seq
DB search
MAEPGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
TYTAFENIYPVLTEFRKVQQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccggggctcgagggcagccagccggtggatctgtccaagcacccctccggc
atcgtccccacgctccagaatattgtatcaacagttaatttggattgtaaacttgacctc
aaagcaatagctttgcaagcacgaaatgcagagtataacccaaagcgttttgctgcagtc
atcatgagaataagggaacccaaaaccacggcactgatatttgcatcgggtaaaatggta
tgtactggagcgaagagcgagcagcaatctaagcttgcggcaagaaagtatgctcgtatt
attcagaaacttggttttcctgctaagtttaaggactttaagattcagaatattgttggc
tcttgtgatgtcaagtttccaattaggcttgagggccttgcatattctcatggtgccttc
tcaagttacgaaccagaactctttcctggccttatctatcggatgaaacaaccaaagatt
gttcttttaatttttgtttcaggcaagattgttttgactggagcaaaggtgagagaggag
acctacactgcattcgaaaacatctatcctgtactgacagagtttagaaaagttcagcaa
tga
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