Miscanthus floridulus: 136522135
Help
Entry
136522135 CDS
T10264
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mflo Miscanthus floridulus
Pathway
mflo00040
Pentose and glucuronate interconversions
mflo01100
Metabolic pathways
Brite
Enzymes [BR:
mflo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
136522135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136522135
NCBI-ProteinID:
XP_066372019
LinkDB
All DBs
Position
18:17889209..17891064
Genome browser
AA seq
457 aa
AA seq
DB search
MASSAVVRSPLSILFYILAAVAATAAAETPTTDAAIDKAYAQLVNVTANQEYWAERAEVA
HAYNRAAYVSDPVAVMERFNDGVRRATATSTRSRSLAHKARGPCSATNPIDQCWRCRGDW
ARNRKRLARCAMGFGHRATGGLAGRIYVVTDPRDDPANLVVPRKGTLRYAVIQDRPLWIT
FARGMVINLCKELIVSSDKTIDGRGAQVHIMGAQITLQNVHNVILHNLHIHDAVPRGGGV
IRDSKHHSGVRGESDGDGISVMGSSDIWIDHVSMRSCADGLVDVVDGSTAVTISNGHFTK
HDHVMLFGASDNAVKDKMMQVTVAFNHFGKGLVQRMPRCRYGFFHVVNNDYTHWLMYAIG
GSQNPTIISQGNRFRAVDGGNFKEVTKREYTPYSQYKDWVWKSQDDLFLNGAFFNQSGGQ
NERRFDRLDLIQAKGGQYAESLTRYAGALNCRVGKKC
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctccgccgtcgtgaggagccccctgtccatcctcttctacatcctcgccgcc
gtggctgccaccgccgccgcggagacgccgacgaccgacgccgccatcgacaaggcgtac
gcgcagctcgtcaacgtcaccgccaaccaggagtactgggcggagcgcgccgaggtggcg
cacgcgtacaaccgcgcggcgtacgtgagcgacccagtcgccgtcatggagcgcttcaac
gacggcgtgcgcagggcgacggcgacgtcgacgcggtcccggtccctggcgcacaaggcg
cggggcccctgctcggcgaccaacccgatcgaccagtgctggcggtgccgcggcgactgg
gcgcgcaaccgcaagcgcctcgccaggtgcgccatgggcttcggccacagggccacgggc
gggctcgccggcaggatctacgtggtgaccgacccccgcgacgaccccgccaacctcgtc
gtccccaggaagggcacgctccggtacgccgtgatccaggaccgcccgctgtggatcacg
ttcgcgcgcggcatggtgatcaacctctgcaaggagctgatcgtcagcagcgacaagacc
atcgacggtcgcggcgcgcaggtgcacatcatgggcgcgcagatcacgctgcagaacgtg
cacaacgtgatcctccacaacctgcacatccacgacgccgtcccgcgcggcggcggcgtg
atcagggactcgaagcaccactcgggcgtccgcggggagagcgacggcgacggcatctcc
gtgatggggtccagcgacatctggatcgaccacgtgtcgatgcgcagctgcgccgacggg
ctggtggacgtggtggacggctccaccgccgtgaccatctccaacggccacttcaccaag
cacgaccacgtgatgctgttcggggccagcgacaacgccgtcaaggacaagatgatgcag
gtcaccgtggcgttcaaccacttcggcaaggggctggtgcagcggatgccccgctgccgc
tacggcttcttccacgtggtgaacaacgactacacgcactggctcatgtacgccatcggc
ggcagccagaaccccaccatcatcagccaggggaaccgcttccgcgccgtcgacggcggg
aacttcaaggaggtgaccaagcgggagtacacgccgtacagccagtacaaggactgggtg
tggaagtcgcaggacgacctgttcctcaacggggccttcttcaaccagtccggcggccag
aacgagcgccggttcgacaggctcgacctcatccaggccaagggcggccagtacgccgag
tcgctcaccaggtacgccggcgcgctcaactgccgcgtcggcaagaagtgctag
DBGET
integrated database retrieval system
