Miscanthus floridulus: 136522416
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Entry
136522416 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: protein argonaute 1D-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136522416
03036 Chromosome and associated proteins [BR:
mflo03036
]
136522416
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
136522416
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
136522416
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
136522416
microRNA pathway
RISC loading complex
136522416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
Gly-rich_Ago1
ArgoMid
DUF4882
Motif
Other DBs
NCBI-GeneID:
136522416
NCBI-ProteinID:
XP_066372333
LinkDB
All DBs
Position
18:135894322..135901286
Genome browser
AA seq
1051 aa
AA seq
DB search
MGSWRPKLPGFGEGSQAAEPGGGGKXGPGRGFRGRGGSYHQKLPQGGRGTGYYQHGQGSM
SQPRGGXIMSQRWQPAGPAAGYMGQGQAYREVQPPHYYGGGRGGRGAGPSTIAPELRQAM
ETSHEPDNISPEAGSPDLSPRASTVEVTDQLKDLSVQDESSMCQDIVQAFPVSSNAYKFP
HRPGSGSIGTRCLVKANHFFAELPDKDLHQYDVSITPEVTSRIVNRSVMEELVKLHKMSY
LGGRLPAYDGRKSLYTAGPLPFISKEFHITLIEEDGGSGVERRKKTYKVVIKFAARADLR
RLEQFLAGRQAEAPQEALQVLDIVLRELPTTRYAPFGRSFFSPDLGRRRSLGEGIESWRG
FYQSIRPTQMGLSLNIDMSATAFFEPLPVIDFVAQLLNTDIHSRPLSDAERVKIKKALRG
VKVEVTHRGNMRRKYRIASLTSQATRELTFPVDQGGAVKSVVQYFQETYGFTIQHTYLPC
LQVGNQQHPNYLPMEVCKIVEGQRYSKRLNQSQIRALLEETCQRPHDRERDIIQTVNHNS
YHEDPYAKEFGIKISERLASIEARILPAPRLKYNETGREKDCLPRVGQWNMMNKKMVNGG
RVRSWICVNFARNVQESIAVGFCRELARMCQASGMDFALETILPPIYAHPDKVERALKAR
FHDAMNMLGPQRRELDLLIGILPDNNGSLYGDLKRICEIDLGLVSQCCCAKQVFKMNKQI
LANLALKINVKVGGRNTVLADAVSRRIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVVA
SQDWPEVTKYAGLVSAQSHRQELIEDLYKVTHDPQKGTICGGMIRELLISFKRSTGQKPQ
RILFYRDGVSEGQFYQVLLHELDAIRKACASLEANYQPQVTFIVVQKRHHTRLFAHNHND
KNSVDTSGNILPGTVVDSKICHPQSFDFFLCSHAGIKGTSRPAHYHVLWDENNFTADALQ
TLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDSSDSGSLASGARGGGAPSNS
STSRSTRAATGGVVRPLPALKDSVKNVMFYC
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgggatcttggagaccgaaactgcctgggtttggcgagggctcacaggctgctgagccc
ggtggtggtgggaagnnaggtcctggaagaggtttccgtggccgcggtggctcctaccat
caaaaactcccacaaggtggtcgtggaactggctactaccagcatggacagggttccatg
tcacaacctcgcggaggcnncatcatgtcgcagaggtggcagcctgctggccctgctgca
ggatatatgggccaaggtcaggcttacagagaagtgcagccaccacactactatggtggt
ggtagaggtggacgtggggcaggcccgtccaccatagctcccgagctgcgccaagcaatg
gaaacttcacatgaacctgataacatctcaccagaagcaggctctccggatctgtcacca
agagcttctactgtagaagttacggatcagctgaaagatttgtctgtacaggacgaatca
agcatgtgccaagacattgtgcaagcatttccagtgtcgagcaatgcatataagtttcct
caccgcccaggaagtggaagtattggcaccaggtgtttggtgaaggcaaatcacttcttt
gctgaattacctgacaaggatcttcatcagtatgatgtttcaatcaccccggaagttaca
tcgcgaattgtgaaccgttctgtcatggaagagctggtgaagctgcacaagatgtcatac
ttgggagggcggcttccagcctatgatggtagaaagagcctatacacggctggtccactg
ccattcatttcaaaagaatttcacatcactctaattgaggaagatggtggttctggagta
gagaggcgtaagaaaacatacaaggtagtgattaaatttgctgcaagggctgatctccgt
cgtctggagcaatttttagctggaaggcaagcagaggctcctcaagaagccttgcaagtt
cttgatattgttctgcgggagctgccaacaacaaggtatgcaccatttgggcgatcattt
ttctctcctgacctggggaggaggcgatcccttggtgagggaatagaaagctggcgtggg
ttttaccagagcattcggcctactcaaatgggcctgtcattgaatattgatatgtcggca
acagctttctttgagccattacctgtgatagattttgttgcacagcttttaaacaccgac
atccactcaaggcctctctcagacgctgaacgtgtcaagataaagaaggccttaagagga
gtgaaggtggaagttacgcaccgtggtaacatgcgacggaagtatcgaattgctagttta
acatctcaggcaactcgggagctaacttttcctgttgatcaaggtggcgcagtgaagtcg
gttgtacaatattttcaagagacctatggctttaccatccagcacacctacctgccctgt
ctgcaagttggcaatcagcagcacccaaattaccttccaatggaggtctgcaaaatagta
gagggacagaggtactctaagagattaaaccagagtcagataagagctcttttagaggag
acatgccagcgcccacatgatcgggagcgtgacattattcagacggtgaatcataactct
taccatgaggatccttatgctaaagagtttggcattaagatcagtgagcgtttggcttca
attgaggcacggattttacctgctcctcggctcaagtataatgaaactggcagagagaag
gactgcttgcctagagttgggcagtggaatatgatgaacaagaaaatggtaaatggtggt
agagtgaggagctggatctgtgtcaattttgctcgaaacgtgcaagagagcattgctgtt
ggattctgtcgtgaacttgctcgcatgtgccaagcctcgggaatggactttgccttggag
actattcttccgcctatatatgcacatcctgataaagtggagagagctctgaaagccagg
ttccatgatgcaatgaacatgctcggaccacagcgcagagaactcgatttgcttattgga
atacttcctgataataacggttctctttatggtgatttgaagcgtatctgtgaaattgac
cttggattagtttcacagtgctgctgtgcaaagcaagtttttaagatgaacaaacagata
ctggcaaatctcgctctgaagataaatgtcaaggttggaggaaggaacacagtgctggct
gatgcagtgtcaagacgcattcctttggtgactgacaggcctaccatcatatttggtgcg
gatgtgacccatcctcatcctggtgaagatagcagcccttccattgctgctgttgtggct
tcccaagattggcctgaggtgacaaagtatgctggtttagtttctgctcaatctcatagg
caagagttaatagaggatctgtataaggtcacacatgatcctcagaaaggaaccatttgt
ggtggcatgatcagggagcttcttatatccttcaaaagatcaactggtcaaaagcctcag
aggatactattctacagggatggtgtgagtgaagggcagttctaccaagttctactgcat
gaattggatgcaatccgaaaggcgtgtgcatcgctggaagcaaattaccaaccgcaggtg
actttcatcgtggtccagaaacggcaccacacgaggttgttcgcacacaaccacaatgat
aagaattcagtcgacacgagtgggaacatacttcctggtactgttgtggactcgaagatc
tgccatccccagagtttcgacttcttcctgtgcagccatgctggcatcaagggcacgagc
cgtcctgctcactaccatgtcttgtgggatgaaaacaacttcacagctgatgcattgcag
acccttaccaacaacctttgctacacttacgcgaggtgcacacgttctgtatccattgtc
ccaccagcctactacgctcatctggctgcattccgcgcccggttctacatggagcctgac
agctcagacagtggatcactggcgagtggcgcccgtggaggcggagcgccgtccaactcg
tcgacatcccgcagtacccgtgccgccaccggcggagttgttaggccccttcccgcgctc
aaggacagtgtcaagaacgtcatgttctactgctga
DBGET
integrated database retrieval system
