KEGG   Miscanthus floridulus: 136523469
Entry
136523469         CDS       T10264                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1b isoform X1
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
mflo  Miscanthus floridulus
Pathway
mflo03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    136523469
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mflo04121]
    136523469
   03036 Chromosome and associated proteins [BR:mflo03036]
    136523469
Enzymes [BR:mflo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     136523469
Ubiquitin system [BR:mflo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    136523469
Chromosome and associated proteins [BR:mflo03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     136523469
    Noncanonical PRC1 (PRC1.1)
     136523469
    Noncanonical PRC1 (PRC1.3/1.5)
     136523469
    Noncanonical PRC1 (PRC1.6)
     136523469
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 zf-RING_4 zf-UDP zf-rbx1 zf-RING_6 zf-C3HC4_5 zf-Nse zf-RING_11 ZNF512_C2HC
Other DBs
NCBI-GeneID: 136523469
NCBI-ProteinID: XP_066373244
LinkDB
Position
2:complement(48955677..48961951)
AA seq 509 aa
MPAQKRPPPPPSPSPSAAPGAGSPPPASPPPPPTAELAEKKPKLEENGSAGAGAEANGNA
NGERSFVRSPFRPSHVDGALLLDLHALMLVYFLFRPRCLALLADSGAKAAAAESSESESE
DADAAKQEFVPVKLPDVRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECP
ACRTHCASRRSLRDDPNYDALIAALYPDIDKYEEEELAFNEEENDRNKQIQASIAEAFRK
QSEVIGRKSTTKATAAAFVRRSRRNIRPNGQNTYFRGRGRASSDDVALACSEDEEDGNSE
NGSKEASSAEESSPEKKQKRLPKWPTPRSSPARGACNDELASDEKDDVGISRENFSTSPL
RAWGKNGTRSQTRHSSFSGSNGRMVKGGRMIKLVECLRNSDDNDGERDVHLCLLPLDGQT
APNLEKSYLCCGPTLSIKQLCQFVANQTSHKDEEVEMYALKPSYSNPVSTNPSGLDKARL
AGEECLSDLRSFTFPNGVLELVYAIKVAN
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgcccgcccagaagcgcccgcccccgccaccctcgccctccccctccgcggccccgggc
gccggctcgccccctcccgcgtctccgccgccgccgccgacggccgagctcgcggagaag
aagcccaagctggaggagaacggcagcgccggcgccggcgccgaagccaacggcaacgcc
aacggtgagcgctcgttcgttcgttcgcccttccgcccctcccacgtcgacggcgctctt
ctcctcgatctccacgcgctgatgctggtttatttcctcttccgcccacgttgtttggct
ttgctcgcagattccggcgcgaaggcggctgcggcggagtcgtcggagtctgagtcggag
gacgcggacgccgcaaaacaggagtttgtaccagtaaaattgccggatgtacgcaaagaa
gtgcagtgtcccatatgcttaggcatcatccggaagactagaacagttatggagtgcctg
caccggttctgtagggaatgcattgacaaatccatgcgacttgggaacaacgagtgccca
gcgtgccgcacacactgtgcgagtcggcgttctttgagagatgatccgaactatgatgcc
ttgattgcagctctatatccagacattgacaaatatgaagaagaggagctagcgttcaac
gaagaggagaatgaccgcaacaagcagattcaagcatccattgctgaggcttttcggaaa
caatcagaagttattgggcggaagtctaccaccaaagctactgctgctgcattcgtaaga
agatcacgccgtaacattcggcctaatgggcagaatacctatttccgtggccgaggaaga
gccagttccgatgatgttgctctggcctgttctgaagatgaagaggatggaaacagtgaa
aacggtagcaaagaggcctcatctgctgaggagagttccccagagaaaaagcagaaacga
ctgccaaaatggccaacaccacgttcttcacctgcccgaggagcatgcaatgacgagctt
gcttctgatgaaaaggacgatgtaggaatatccagggaaaattttagcacatctcctcta
cgagcatggggaaagaatggcactcgcagtcagactcgccacagtagcttcagtggttca
aatggtaggatggtcaagggtgggcgcatgatcaagttggttgagtgcttgcgaaattct
gacgacaatgacggcgagcgtgatgtgcatctttgtctgcttccacttgatggacaaacc
gcaccaaatctggagaagtcatatctgtgttgcggcccaactctctccatcaaacaactt
tgtcagtttgtcgccaatcagacatctcacaaagatgaagaagttgagatgtatgcgctg
aagccttcttatagcaatcctgtcagcactaatccatctggtcttgacaaagcaaggctc
gcaggggaggaatgcctttcagacttgcgctcgttcacatttcctaatggggttctggag
ctggtatatgccataaaagtggcgaactag

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