Miscanthus floridulus: 136523803
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Entry
136523803 CDS
T10264
Name
(RefSeq) mRNA-decapping enzyme subunit 2-like
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136523803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136523803
Enzymes [BR:
mflo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
136523803
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
136523803
mRNA degradation factors
5'-3' decay
Decapping complex
136523803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
Motif
Other DBs
NCBI-GeneID:
136523803
NCBI-ProteinID:
XP_066373460
LinkDB
All DBs
Position
2:complement(51223439..51227308)
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AA seq
345 aa
AA seq
DB search
MALEPLHDVGVQHQHAAGRQQVTMAGGRGLNRSSSRGQLPPQELLDDLCSRFILNVPKEE
LESFERILFLLEQAHWFYEDNSVEHNPNLKSLSFKDFTSLMFKSCTALRPYIAHLDDIYK
DFNNYKFRVPVSGAIILDDTYERCLLVKGWKAGASWSFPRGKRNKDEEDHTCAVREVLEE
TGCDVSTFLHLDDYIEVSIGQQRVRLYIITGVKRDTVFAPQTKKEISEISWHRIDELLPA
SDDAVSRAVNGMKLYMVAPFLTGLKAWIATHPPPLHQKPETSARGTVWKAKNSSSGSTPV
ENPVAKAVSDVQAHHVDNRPGRSFRNFRFDTVSILQSMEASLRRT
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgagccgctccatgatgtcggcgtccagcaccagcacgccgcgggacgccag
caggtgacgatggcgggcggccggggactgaaccggtcttcatcgagggggcagctgccg
ccccaagagctgcttgacgatctctgcagccggttcattctgaatgtgcccaaggaggag
ctggagtcgttcgagcggatcctgttcctgctggagcaggcgcactggttctacgaggac
aactccgtcgagcacaaccccaacctcaagtccctctccttcaaggacttcacctccctc
atgttcaagagctgcactgctctcaggccctacatcgcgcacctggatgatatctacaag
gacttcaacaactacaagttccgtgtccccgtgtccggtgccatcatcctagatgacact
tatgagaggtgcttgcttgttaagggatggaaggctggggccagctggagctttcctcgt
ggaaagaggaataaagatgaggaagatcacacatgtgctgttagagaagttctagaggaa
actgggtgtgatgtttctacatttttacatttggatgattacattgaagtttcaattgga
caacaaagggttcggctctacatcataacaggggttaaaagagatactgtgtttgcacct
caaaccaagaaggaaatcagtgaaatctcatggcacagaattgatgaactcttaccagct
agtgatgacgcagtatctcgggcagtgaatggaatgaagctgtacatggttgctccattt
ttgacgggtcttaaggcttggattgccacgcatcctccaccactgcatcagaaaccagag
acatctgctagaggtactgtgtggaaggcgaagaattcgtcaagtggcagtaccccagtg
gagaaccctgttgctaaagcagtatctgacgtgcaggcgcatcatgttgacaaccgcccc
ggtcgcagcttcagaaacttcaggtttgacacggtaagcatcctgcagtccatggaggct
tccttacgacgcacctag
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