Miscanthus floridulus: 136524733
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Entry
136524733 CDS
T10264
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mflo04131
]
136524733
04121 Ubiquitin system [BR:
mflo04121
]
136524733
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136524733
Membrane trafficking [BR:
mflo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
136524733
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136524733
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_16
Prok-RING_1
FAR1_N
Zf_IFT144_1st
Anti-TRAP
Motif
Other DBs
NCBI-GeneID:
136524733
NCBI-ProteinID:
XP_066374091
LinkDB
All DBs
Position
2:complement(58919419..58925977)
Genome browser
AA seq
397 aa
AA seq
DB search
MSTPAAAYYAAAARKQYFCYQCNRTVLIAASAAAAGELSCPECHGDFLEEVTVPAPTFIP
LPFPFPFASTTTIPAGSTAPAPAAAPAPAAAGSGGSPPFSSSSSSAATSPSQPNDISSIL
NIFLGLGGEQPPIRSGGGSGSRAAAGTATPENEPEPFDPVMYFQNYIHSLMEGGANIQVL
LDDPSVNLGSGPGLGRIGGASFGDYFVGPGLEQLIEQLAENDPNRYGTPPAAKSALSSLP
DVVVTHTMVAAAEGAECAVCKEDFSPGEVAKQMPCKHIYHTDCIVPWLELHNSCPICRFE
LPTDDPDYEGRKGSNPQPAVGIAAAAAASGSSTAAEGQMEERQENPRVVERRFNVSLPWP
FSGLGGQTSQQDGNSGGSGSNSQGGGSQDGGPPSSKK
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactcctgccgccgcctactacgccgccgccgcgcgcaagcagtacttttgctac
caatgcaaccgcaccgtcctcatcgcggcctctgccgccgccgccggggagctctcgtgc
cccgagtgccacggcgacttcctcgaggaggtcaccgtccctgccccgaccttcatcccg
ctccccttcccgttcccctttgcctccaccaccacgatccccgccggcagcaccgccccg
gcccccgccgccgcccccgccccagcagccgccggctccggcgggtcccctcccttctcg
tcctcgtcctcctccgccgcgacctccccgtcccagcccaacgacatctcctccatcctc
aacatcttcctcgggctcgggggcgaacaaccccccatcaggtctggcggcggctccggc
tcgcgcgcagccgccggcacggccacccccgagaacgagccggagcccttcgacccggtc
atgtacttccagaattacatccacagcctcatggaggggggcgccaacatccaggtcctc
ctcgacgaccccagcgtcaacctcggctctggacccggcctcggccgcatcggcggggca
agcttcggggattacttcgtcggcccaggcctcgaacaactcatcgagcagctcgccgag
aacgaccccaaccgctatggcacgccgccggctgccaagtcggccctctcctcgctcccc
gatgttgtcgtgactcacaccatggttgcagctgcggagggtgctgagtgtgccgtctgc
aaggaggatttctcgcctggggaggtggccaagcagatgccctgcaagcacatctaccac
accgactgcatcgtgccgtggcttgagcttcacaactcgtgccccatctgccgctttgag
ctgcccactgacgatcctgactatgaggggcggaagggctctaatcctcagccggctgtt
ggtattgctgctgctgcagctgcatctgggagctcgactgctgctgagggacaaatggag
gagaggcaggagaatccaagggtggttgagaggaggttcaatgtctcgctgccatggcca
ttcagtggattgggaggccaaacatcgcagcaggatgggaacagtgggggcagcggaagc
aactcacaaggcggtggctcgcaagatggtggcccacccagcagcaagaaatga
DBGET
integrated database retrieval system
