Miscanthus floridulus: 136525343
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Entry
136525343 CDS
T10264
Name
(RefSeq) probable serine/threonine protein phosphatase 2A regulatory subunit B''delta
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
mflo Miscanthus floridulus
Pathway
mflo03015
mRNA surveillance pathway
mflo04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136525343
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
136525343
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mflo01009
]
136525343
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136525343
03036 Chromosome and associated proteins [BR:
mflo03036
]
136525343
Protein phosphatases and associated proteins [BR:
mflo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
136525343
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
136525343
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
136525343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
DUF4187
P2R3B_EF-hand
Motif
Other DBs
NCBI-GeneID:
136525343
NCBI-ProteinID:
XP_066374469
LinkDB
All DBs
Position
1:57743550..57759564
Genome browser
AA seq
541 aa
AA seq
DB search
MEVEPARRDAAALDPELLQLAELAPGALRENSIIADALYSQWLVLPETTKLVKSLIEDAK
TGAVLNVAGSSASTNAASSGSLPSMFPAGSAPPLSPRSTSGSPRVMRRGSGAGPSSLGSP
LKLVSEPVREVIPQFYFKNGRPPTKDLKEQCLSRTDHLFFGGEGLQIQEFRSVTKDICKL
PSFFSSVLFKKIDVACTGTVSRDAFVEYWINDNKITMDMASQIFEILRKPGYTYLTQDDF
KPVLKELLATHPGLEFLQGTPEFQERYAETVIYRIFYSINRSGNGHLTLRELKRGNLIAA
LQQLDEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHSLTYRIVDR
IFTQIPRKFTSMSEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGILTSNEMQF
FYEEQLHRMECMAQEPVLFEDILCQMIDMIGPENESYFTLRDLKRCKLSGNIFNILFNLN
KFMAFETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDGEDASNGSGDVWDESLEAP
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggagccggcgaggagggacgcggcagcgctggacccggagctgctgcagctg
gcggagctcgcgccgggcgcgcttcgcgagaactccataatagctgatgcgctctactcg
cagtggctcgtgctacccgagacgaccaagctggtaaagtctttgattgaggatgcaaag
actggcgccgtgcttaatgttgctggaagctcggctagcacaaatgctgcttcaagtggt
tctctaccgtcgatgtttcctgctggtagtgctccaccactttctcctaggagcacttct
ggttccccccgtgttatgagacgaggatctggagctggaccatcgtccttgggttctcca
ttaaaattagttagtgaaccagtgagagaagttatacctcagttttacttcaagaatggg
cgtcctcctacaaaagatttgaaggagcagtgcttatcaagaacagatcacctatttttt
ggtggggagggacttcagattcaagaattcagatcggtcacaaaggacatatgtaaactt
ccttcattcttctctagtgtccttttcaagaaaattgatgttgcatgcaccggaactgtc
tcaagggatgcatttgtggagtactggatcaatgacaataagattacaatggatatggct
agtcaaatatttgaaatattaagaaagccgggttacacatatctcactcaggatgacttc
aagcctgtcctgaaagaactactggcaactcaccctggcttagagtttttacaagggacc
cccgagtttcaggagagatatgcggagactgtaatatatagaatcttttactccataaat
agatctgggaatggccatctgactctgagagagctcaaacgtggaaatttaattgctgca
cttcagcagttagatgaggaggaagatatcaacaaagtgttgagatacttctcatatgag
cacttttatgtgatctactgtaaattctgggagctggatacagatcacgattttttgatt
gataaggaaaatctcatcagatatggaaatcattcgttgacctatagaatagttgataga
attttcacacagatcccaaggaaattcacaagcatgtcagaaggaaagatgggttatgaa
gactttgtttactttatattatcagaggaagacaaatcatctgagcctagccttgaatac
tggtttaagtgcattgatcttgatggtaatggtattttaacttccaatgaaatgcaattt
ttctacgaggagcaattgcaccgaatggagtgcatggcacaggagcctgtgctttttgag
gacatattatgccagatgattgatatgattggaccagagaatgagagctatttcactcta
agggacttaaaacggtgtaaactctcaggaaatatattcaatattcttttcaatctcaac
aagttcatggcgtttgaaactcgtgatccattcctcattcgccaggaacgtgaaaatcca
actctaactgagtgggatcggtttgcgcatagagaatatattagattgtccatggaagaa
gatggtgaggatgcttcaaatggaagtggtgatgtgtgggatgaatcacttgaggctcca
ttctga
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