Miscanthus floridulus: 136525487
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Entry
136525487 CDS
T10264
Name
(RefSeq) protein CHROMATIN REMODELING 20-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mflo03000
]
136525487
03036 Chromosome and associated proteins [BR:
mflo03036
]
136525487
Transcription factors [BR:
mflo03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
136525487
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
136525487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
136525487
NCBI-ProteinID:
XP_066374554
LinkDB
All DBs
Position
2:64429093..64443918
Genome browser
AA seq
1481 aa
AA seq
DB search
MNKDGILSDDKMARMESFQPNGQLVDIIIIDSQSDENKIGVETSIRDSSLKEHKEPPCTT
MDNNANEETSITDDDSEADSYEFSLRESDNEQASASEEGTEVPLTEEEVEELVAEFLEVE
SKAAQAQESLEKESLDKIETEVRLELSERLQGDELESAVSTEMDQFQMQWENELDDLEIR
SSILLEQLDAAGIELPRLYKSIESQVPNVCETEAWKSRTHWAGSQVPEEANRSIKNADEY
LQSCRPVRRKHGRLLEEGASGFLAGKVPVGDDDSVKCHEKSWSSFNELIKSKENAENTFG
SSNWASVYLASTPQEAAALGLQFPGVDEVEEISEVDGVFDDIKGVDEVELSEEQRRKYRK
VTEEDDAKIMKFLQRRSKGKRTRGWCKENIGLVSSCDEKPLPENGVLGAKSDLPSSKKLK
TDENKVSIETLKHTFEDDENEKRLKTVIIESDDDMQIDNKRALQKDGEGSSAEVEKVVDI
IDLDLFPSQSPKLPTKSLPKTFNCTICSEMLNASDVHRHPVLDVVVCGSCRFLVIEKNRL
EDPVSGGYCTWCAQSELLQSCSSCKLLFCTNCLSKNLGEECLSEAKATGWQCCCCIPSQL
ELLISECDKALSGVESSDSESSNTELSGPEDNGPVSKRRMKKSIRRIMDDTELAEETKRK
IAMEKARQDHLKSMQEQSATKLRSENVGTPFEVPAEICLQDAGDGLIVNLAREEDEEPVR
IPSSMSSKLKPHQVEGIRFIWENVIQSVKKVKSGDKGLGCILAHNMGLGKTFQVITFLYS
VMRHAQLGLRTALVVTPVNVLHNWRKEFSKWRPAELKPLRVFMLEDVARVKRPDLLTKWR
VKGGVLLIGYSSFRNLSLGKHVKDKNSANEIAYALQCGPDILVCDEAHMIKNRRADITQA
LKQVRTQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSTHEFRNRFQNPIENGQHMNSTS
DDVKIMNQRSHILFEQLKGFVQRKSMNVVKNDLPPKKVFVITVKLSELQRKLYKKFLDVH
GFSSSGYSEKSHSSFFAKYQTLAQVWNHPGLLQMAKEQRGNLRREDAVENFMMDDSSSDD
NVENYLPNGEKQKDRADQQSKKSNIVNEESNWWEELLDENTYMEADYSGKMTLLLDILSK
SSELGDKVLVFSQSLTTLDLVEFYLAKLQINGKEGKHWKRGKDWYRLDGSTPSSERQNLV
EMFNDPGNTRVKCTLISTRAGSLGINLHAANRVVLLDGSWNPTHDLQAIYRVWRYGQTKP
VYAYRLMAHRTMEEKIYKRQVTKEGLAARVVDRQQVSRTISKEEMLHLFEFGEEELMEQN
ENGSTIIEKPSTSETIKTSEPVPVDSLMLSLLSEQTRWISGYHEHEALLQENEEEKLTKE
EQDMALSEWESLSKAAPDPERKSNMSAVPTYPNLVRPLKPASRSRQLQQPKVNSNNQKKC
NNLTHLLTLRSNGTKAGCTTTCKECGQEISWETLNRDGRSR
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggatggaatattgtctgatgataagatggcaaggatggaatcttttcaacca
aatggacagctagtagatataataatcattgactctcaaagtgatgaaaataaaattggt
gtggaaactagcataagagacagttccttgaaggagcataaggagcctccatgcacaaca
atggacaataatgcgaatgaagaaacatccattactgatgatgattcagaggccgattca
tatgaattctctctccgagaatcagataatgaacaagcttcagcatccgaggaaggcact
gaggtacctctgactgaggaagaagttgaagaattggttgctgaattcctcgaagtcgag
agcaaagcagctcaagcgcaagagtcacttgaaaaggagtcactggacaaaattgaaact
gaagtaagattggagttatctgagaggcttcaaggagatgagttagaatcagctgtgtca
actgagatggatcaattccagatgcaatgggaaaatgaacttgatgatctagagatccgc
agttctattctgttggaacaacttgatgctgctggaattgaacttcccagactctataag
tcaattgaaagtcaagttccaaatgtttgtgaaactgaagcatggaagagcaggacacat
tgggctggttctcaagtgcctgaagaagctaaccgatccattaaaaatgctgatgaatac
ctccagtcttgcagacctgtacggagaaaacacgggaggttgctggaggaaggtgctagt
ggctttcttgctggaaaagttcctgttggggatgatgattctgttaagtgtcatgagaaa
agttggagctctttcaatgaacttattaaatctaaggagaatgctgagaatacatttggt
agcagtaactgggcatcagtttatcttgcaagcaccccccaggaagcagccgcattaggt
ctccagtttcctggagttgacgaggtagaggagatatcagaagttgatggtgtttttgat
gatataaaaggtgtagatgaagtagagctttctgaggaacagagaaggaaatacagaaag
gttacggaagaggatgatgcaaaaataatgaagttcttgcagcgtcgttcgaaaggaaaa
aggacgagaggctggtgtaaggagaacattggtttggtctcatcatgtgatgagaaacct
ctaccagaaaatggtgtcttaggtgctaaaagtgaccttccttcatctaaaaaactcaaa
actgatgaaaacaaagtttctattgagacattgaagcatacatttgaagatgatgagaac
gagaagagattgaaaactgtgataatagaaagtgatgatgatatgcagatagataacaaa
cgagctttacaaaaggatggtgaaggtagttcagcagaagtcgaaaaagtggttgatatc
attgatcttgatcttttcccttcacaaagccctaagctccctactaaaagtttgcctaaa
actttcaattgtactatttgctctgaaatgttgaatgcctctgatgtgcatcgccaccct
gtcttggatgttgttgtttgtggatcatgcagatttcttgtgatagagaagaatcgtctt
gaggatcctgtatctggtggttattgcacttggtgtgcacaaagtgaactgcttcaaagt
tgtagttcttgtaagcttcttttctgtacaaattgcctgtcaaagaatttaggtgaagaa
tgcttatcagaagctaaagccactggttggcagtgttgctgctgcatacccagtcaactg
gaacttttaatttctgaatgtgacaaggccctcagtggtgtggaatcttctgattcagag
agtagcaacacagagctttctggaccagaggataatggtcctgttagcaagcgaagaatg
aagaagagtattagaagaattatggatgatacagaacttgctgaggaaacaaagcgtaaa
attgcaatggagaaggcaaggcaagaccatttgaagtccatgcaagaacaatctgccacc
aagttaaggagtgagaatgttggaactccctttgaagttccagcggaaatctgtttacag
gatgctggtgatggacttatagtcaaccttgccagggaggaggatgaggaacctgttagg
attccaagcagcatgtcttctaaactgaaacctcatcaggtagaaggaataaggtttata
tgggaaaatgttattcaatctgttaaaaaggtcaaatccggggataaaggtcttgggtgc
attttggcgcataacatgggccttgggaaaacctttcaggttattacattcctctatagt
gttatgagacatgctcaattgggattgcgcacagcacttgttgtcacccctgtcaatgtt
cttcataactggaggaaagagtttagcaagtggcgtccagcagagctgaaacctcttcgt
gtttttatgttggaagatgttgcaagggtgaaaaggccagatttactaaccaaatggcga
gtgaagggtggagtgcttctcattggttattcatcatttaggaacttatcccttggaaag
catgtgaaggacaaaaattctgcaaacgaaattgcttatgctttgcagtgtgggccagat
attcttgtatgtgatgaagcacatatgataaagaataggagggccgacattacgcaggct
ctgaaacaagtaagaacacagagaagaattgctttaactggatctccgttgcagaataat
ttgatggaatattattgtatggttgattttgtcagggaaggttttcttgggagtactcat
gaattccgaaacaggttccagaaccccattgaaaatgggcaacacatgaattcaacatca
gatgatgtcaaaatcatgaaccaacgatcacacatcttgtttgaacaactgaaaggtttt
gtccagcggaagagcatgaatgttgtgaagaatgatctaccaccaaagaaggtttttgtt
attactgtaaagctatctgagctacagaggaagctatacaaaaagttcttagatgttcat
ggtttctcaagtagtggttattcagaaaaatctcacagttccttctttgccaagtaccaa
acattagcccaggtatggaatcatcctgggctcctccagatggctaaagaacagagagga
aatttgcgtcgtgaagacgctgttgagaattttatgatggatgacagttcaagcgatgat
aatgttgaaaattacttgcctaatggagagaagcagaaggatagagctgatcagcagtcc
aagaaaagcaacattgtgaatgaggaaagtaactggtgggaggaacttttagatgagaat
acttatatggaagcagattacagtggcaaaatgaccttgctccttgatatcctgtcaaaa
agttctgaattaggcgacaaagtattagtttttagccagagtttgaccactctggattta
gtggagttttatctggcaaaactgcaaatcaatggaaaagaaggcaaacattggaagcga
gggaaggattggtacaggcttgatgggagcactccatcttctgaacggcagaatcttgtg
gagatgtttaatgaccctggaaacacaagagtgaaatgcacgttgatatcaactcgtgct
ggatccctgggtatcaaccttcatgctgcaaatcgcgtggttcttctggatggatcatgg
aatccaacacatgatctgcaagccatttatcgggtttggaggtatggccagaccaaacct
gtatatgcctaccgcctaatggcacatcgaacaatggaagagaaaatatataaacgccag
gtgacaaaagaaggccttgcagcaagggtggtggatagacagcaagtttcaagaaccatc
tccaaagaagagatgctgcatctttttgaatttggcgaagaggaattaatggaacagaat
gagaatggttctaccataattgagaagccatccacttctgaaactattaaaacctctgag
cctgtacctgtcgacagtctcatgctgagcctactcagtgagcaaactcggtggatttca
ggttaccatgaacatgaagctctcctccaagaaaatgaagaggaaaagcttacaaaggag
gagcaggatatggctttgtcagagtgggagtcattgagcaaagctgcacctgatcccgag
agaaaatcaaacatgagcgcagttccaacgtatcctaatcttgtgcggccacttaagcct
gcttcaagaagccggcaactgcagcaacctaaggttaactcaaataatcaaaagaagtgc
aacaacttaacccacttgctgactctaagaagtaatggcacgaaagcagggtgcacgaca
acctgtaaggagtgtggccaggagattagttgggagactctaaacagagatggtaggtcg
agatga
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