Miscanthus floridulus: 136525614
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Entry
136525614 CDS
T10264
Name
(RefSeq) cell division control protein 48 homolog E-like isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mflo Miscanthus floridulus
Pathway
mflo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
136525614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136525614
03009 Ribosome biogenesis [BR:
mflo03009
]
136525614
04131 Membrane trafficking [BR:
mflo04131
]
136525614
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mflo04147
]
136525614
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
136525614
Ribosome biogenesis [BR:
mflo03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
136525614
Membrane trafficking [BR:
mflo04131
]
SNARE
SNARE associated proteins
Others
136525614
Autophagy
Aggrephagy
Other aggrephagy associated proteins
136525614
Exosome [BR:
mflo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
136525614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
AAA_5
AAA_33
AAA_22
AAA_14
TIP49
CDC48_2
NPHP3_N
RNA_helicase
nSTAND3
ATPase_2
Mg_chelatase
AAA_17
AAA_28
AAA_18
Parvo_NS1
Viral_helicase1
Vps4_C
IstB_IS21
ABC_tran
AAA_7
NB-ARC
AAA_lid_PRS2_C
AAA_24
TsaE
Zeta_toxin
DUF815
ResIII
NACHT
Zot
Motif
Other DBs
NCBI-GeneID:
136525614
NCBI-ProteinID:
XP_066374644
LinkDB
All DBs
Position
2:complement(66276601..66281757)
Genome browser
AA seq
837 aa
AA seq
DB search
MASQGEPSASASDPKEKKDYSTAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLF
RGDTVLLKGKKRKDTICIVLADETCEEPKVRMNKVVRQNLRVRLGDVVSVHQCQDVKYGK
RVHILPIDDTVEGITGNLFDAFLKPYFLEAYRPARKGDLFLVRGGMRSVEFKVIETDPAE
YCIVAPDTEIFCDGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSI
GVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA
EKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRSHVIVMGATNRPNSI
DPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLELISKDTHGYVGADLAA
LCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALGTSNPSALRETVVEVPN
VSWEDIGGLENIKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN
ECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQVCTRLTLA
LYYFLCHVLCLTDVSAMLQRGSSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRP
DIIDPALLRPGRLDQLIYIPLPDEQSRLQIFKACLRKSPVAKDVDLNALAKYTQGFSGAD
ITEICQRACKYAIRENIEKDIERERRRKDNPEAMEEDEVDEIAEIKAAHFEESMKYARRS
VSDADIRKYQAFAQTLQQSRGFGSEFRFSEQSATAGAAAADPFASAGAAADDDDLYS
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccaaggggagccctcggcgtccgcttccgatccgaaggagaagaaggactac
tcgacggcgatcctggagaggaaaaaatctccgaaccgccttgtcgtcgacgaggccacc
aacgacgataactccgtcgtcgcactgcaccctgacactatggagaggctgcagctcttc
cgcggcgataccgtgctcctcaagggtaagaagaggaaagacactatttgcattgtcctt
gcggatgaaacctgtgaggagccaaaggttcggatgaacaaggttgtccgccagaacctg
agggtgaggcttggtgatgtggtttctgtccaccagtgccaggatgtaaaatacgggaag
cgtgtgcacattcttccaattgatgatacagttgaaggcattacagggaacttgtttgat
gccttcttgaaaccatacttcctggaagcatacaggcccgcgaggaaaggagaccttttc
cttgtcaggggtggaatgagaagtgtggaattcaaagttatagagactgatcctgctgaa
tattgtatcgttgcgccagatactgaaatattttgtgatggggagcctattaagagggag
gatgaggagcgtcttgatgaagttggttatgatgatgttggtggagttagaaaacaaatg
gcccaaatcagagagcttgttgagcttccactacgccatcctcagcttttcaaatctatt
ggtgtgaagccaccaaagggcatattgctgtatgggccacctggttctggaaagactctt
attgctcgtgctgttgcaaatgagactggagcctttttctttctgatcaatggcccagag
attatgtcgaagctagcaggagagagtgagagcaatctccgaaaggcatttgaagaagcg
gagaagaatgctccatctatcattttcattgatgaaattgattccattgcacccaagaga
gagaagaccaatggagaagtagagcgtcgtattgtttcacagctactgactcttatggat
ggactcaaatctcgttcccatgttattgttatgggtgctacaaacagaccaaacagcatt
gatccggctcttcgaagatttggaaggtttgacagggaaattgacattggagttcctgat
gaagttggccggcttgaggttctccgcattcacactaagaacatgaaactagctgaagat
gttaatttggaactcatttcaaaggatacccatggatacgttggtgctgatcttgctgcc
ctttgcactgaggctgctcttcagtgcattcgtgagaagatggacatcatagatcttgag
gatgagacaatagatgcagagatattgaactcgatggctgttacaaatgaccatttcaag
actgcgcttggaacaagcaacccatctgctctccgtgaaactgttgttgaagtcccaaat
gtctcttgggaggatattggtgggctggagaatatcaagagggagctccaggagactgtt
caatatcctgtggagcatccggagaagttcgagaagtttggtatgtctccatccaaagga
gttctgttctatggtcctcctggttgcggtaagaccttgttggcaaaggcaattgccaat
gagtgccaggctaacttcatcagtatcaagggtcctgagttgcttaccatgtggtttggt
gagagtgaagccaacgtccgtgaaatcttcgacaaggctcgccaatctgctccttgtgtc
ctcttctttgatgagcttgactcgattgctactcaggtctgtacacgtctcaccttggct
ctttattattttttgtgtcatgttttatgtcttacagatgttagtgcgatgttgcagaga
ggaagcagtgtgggtgatgctggaggtgcagctgatagagtgcttaatcagctactgaca
gagatggatggcatgaatgccaagaaaactgtgtttattattggggctacaaacaggcct
gacatcattgaccctgctctgctgaggccagggcgtcttgaccagctgatctacattcca
ctgcctgatgagcagtctaggctccagatcttcaaggcttgccttaggaagtcccctgtg
gcgaaggatgtggacttgaatgctcttgctaagtacacgcaagggttcagtggagcagat
atcacagaaatttgccagcgtgcgtgcaaatatgcaatcagagagaacattgagaaggac
attgagagggaaaggcggagaaaggacaaccctgaggcgatggaagaagatgaagtggac
gagattgccgagatcaaggcggctcacttcgaggagtcgatgaagtatgctcggcgtagt
gtcagtgatgctgatatccgcaagtaccaggcatttgcccagacattgcagcagtcccgt
gggttcggcagcgagttccgcttctcggagcagtcagcaacagctggtgctgctgcagcc
gatccgtttgcctctgccggtgctgcggctgatgatgacgatctatacagctag
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integrated database retrieval system
