Miscanthus floridulus: 136525809
Help
Entry
136525809 CDS
T10264
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mflo04131
]
136525809
04121 Ubiquitin system [BR:
mflo04121
]
136525809
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136525809
Membrane trafficking [BR:
mflo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
136525809
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136525809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING-like
zf-C3HC4_3
zf-Nse
Prok-RING_1
zf-RING_Vps41
Zn_ribbon_6
Motif
Other DBs
NCBI-GeneID:
136525809
NCBI-ProteinID:
XP_066374767
LinkDB
All DBs
Position
19:complement(30127954..30130759)
Genome browser
AA seq
508 aa
AA seq
DB search
MSTGAGGGARGRRRRTWRLYWCYVCGRTVRAVSYPTSDVFCPRCFGRFLHEIDLPAPRPV
VPPADQFFQPPFLPYDGPRRWVIYTGDARDPTADADTPLPRRPRRVPSPPPALATRRPDE
DYDVDAPPPPPVVGWDEFFIGPNLNALIERLTQDDRPGPAPAPESAIDSLPTVQVSPAHL
SDGSQCPVCKEEFELGEAARELPCKHAYHTDCIVPWLRLHNSCPVCRQELPQQPADGAQE
GGGREEGSGETEAPAPGPVVMAGWGPLAWLPLPRGPDGDGWVRNEANDGDADAGGGGACA
PAILQSFVVVAACFVVLSFFDHNADAEFLNKPLAHFSEMQTIFGNSMATGRFAEDSNSAL
GTEDANSENEDMAANVGGEMNGQGGSDATTLPTNHGATSSGSKTKKAKVSVDEEEGLIAA
INRVGDRLVVAEAIEKSTAPPPPGPSNELPEDLFDMLVGLPGFEATHISVYFQHLVANPG
IGKAFYKLPFDHKLIWVALFVAERFPGQ
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgggcgcgggcggaggcgcgcgaggacggcgccggcggacgtggcgcttgtac
tggtgctacgtgtgcggccgcacggtgcgcgccgtctcgtacccgacctcggacgtcttc
tgcccgcgctgcttcggccgcttcctgcacgagatcgacctgcccgcgccgcggcctgtg
gtcccgccggccgaccagttcttccagccgccgttcctcccgtacgacgggccccgccgc
tgggtcatatacaccggcgacgccagggaccccacggccgacgcggacacgccgctccct
cgccgcccccggcgcgtcccgtccccgccgccagcgctggcgacacggcgcccggacgag
gactacgacgtcgacgcgccaccgccacctcccgtcgtcggctgggacgagttcttcatc
gggcctaacctgaacgcgctcatcgagcgactcacgcaggacgaccgccccgggccggcg
ccggcgccagagtcggccatcgactcgctccccacggtgcaggtctccccggcgcacctg
tctgacggctcgcagtgccccgtgtgcaaggaggagttcgagctcggggaggccgcgcgg
gagctgccgtgcaagcacgcgtaccacaccgactgcatcgtgccgtggctccggctccac
aattcgtgcccggtctgccgacaggagctgccgcagcagccggcggatggggcacaggag
ggcggcggccgcgaagaaggaagtggcgagacggaggcgccggcgccggggcccgtggtg
atggccggatgggggcccctggcttggctgccattgccacgcgggccggacggggacggt
tgggtgaggaatgaagcgaatgacggtgacgctgacgccggcggcggcggtgcttgtgca
ccggctatccttcagtcttttgtcgtcgtcgctgcttgctttgtcgtcctctcgttcttt
gatcacaatgctgatgctgaattcttaaacaagcctcttgcacacttttctgagatgcaa
acaatctttggaaacagcatggctacaggaaggttcgccgaggattcgaattctgcatta
ggtacagaagatgctaatagtgaaaatgaagacatggctgcaaatgttgggggtgagatg
aatggacaaggtgggagtgatgccactacattgcctactaatcatggggctacttcatcg
ggcagcaaaacaaagaaagcaaaagttagtgtagatgaagaagagggactgattgctgcg
atcaatcgtgttggtgacagacttgtagttgcagaagctatagaaaagtccactgctcca
cccccgccaggccccagcaatgaattaccagaagatctatttgatatgttggttggcctt
ccaggttttgaggccacacacatatctgtgtacttccaacatctggtggccaacccaggc
attgggaaggcattctacaagcttccatttgatcataagttaatttgggttgctttgttc
gttgctgagaggttcccaggacagtaa
DBGET
integrated database retrieval system
