KEGG   Miscanthus floridulus: 136526335
Entry
136526335         CDS       T10264                                 
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog A-like isoform X1
  KO
K08775  breast cancer 2 susceptibility protein
Organism
mflo  Miscanthus floridulus
Pathway
mflo03440  Homologous recombination
mflo03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    136526335
   03460 Fanconi anemia pathway
    136526335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mflo04121]
    136526335
   03036 Chromosome and associated proteins [BR:mflo03036]
    136526335
   03400 DNA repair and recombination proteins [BR:mflo03400]
    136526335
Ubiquitin system [BR:mflo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   BRCC complex
    136526335
Chromosome and associated proteins [BR:mflo03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     136526335
DNA repair and recombination proteins [BR:mflo03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     136526335
   FA (Fanconi anemia) pathway
    Downstream FA components
     136526335
SSDB
Motif
Pfam: BRCA-2_OB1 BRCA2 BRCA-2_helical
Other DBs
NCBI-GeneID: 136526335
NCBI-ProteinID: XP_066375132
LinkDB
Position
2:78066642..78114657
AA seq 1268 aa
MKMLKLLDNGILAASSQFCKQDLEGLLLWNRVQLKRQVQFWRMDDIKRSGNGDTNVCATP
FQFETPKSVLMSSSLIMNDMTSTPEENTSVRAEKCFNDGGQLPLFQTGSGRSVTVSKGSI
KRASAFLEPRNIAKELEDEAYLNGGYATSIFKTGIGKSILATENSRERAQFVLEAKEAVK
QGYEDCGSPLPMFQTGSGKSVLVSESSVQKARAVLKEEEHYKLVKTDKKIAAFVPPLKTS
RARTVNVSSTGVSRAATLLGLEENTLSTQFFGHVSDKLGTKITVKRGNPEHRLDVASTSA
ISSGTHKGTYPTENPTHMDRHQQFGFSKSTTSDAGEHSIRFSTAGGRSMAISADALQRAR
SLLGDSDLVVSPNDSIGHSLASATEKLPKSTISPKGDVSNLSHGTRAIGYAVPDAPLTKK
SANQFHMGREYRPINEIPKVPKPPSRCLSEGNNVSNAKDKTQWHHMPAGPLVDITNYMAT
CSGNTDRLANGKRIIGGRNSISPFKRPRSSRFIMPIKNNKLSSAGESIVPPMQISPCRTM
LSARYPFQHQRKNYKEYFGGPPCFKYLTEHVTDDVKLMDARRAEKFRFQHTDIGAEEFQK
MLLTCGASLSCATKEWVSNHYKWIVWKLASLERCYPTRAAGKFLTVDNVLEELKYRYDRE
VNHGHRSAIKKILEGNASPSLMMVLCISAIYSCPDQNNNKLEVNKVDTNEDNNDNQSLSA
TNRNMSANIELTDGWYSLDASLDITLLEQLEKRKLFVGQKLRIWGASLCGWSGPVSFHEV
PGIVKLAVHINGTYRARWNDTLGFCKHVGLPLAFRCIKASGGRVPRTLVGITRIYPVLYR
ERLPDGRSVVRSERMERKALELYHQRYHLCSTAPPTRPRWTWARDSSRWMACGAVSCSAT
ASTSSASNSGSTSCSAQNVAIRRVGSSSSTYARVSKITEDILFEQQENCHSTDDNEEGAK
IFNMLEHAAEPEFILAGMAPEQLKLFSSYIEKREIVKQNEVSKMVEKALEVAGLSKRDVT
PFLKVRVIGLVNKHSASTSSNKEGLITIWNPTEMQKHNLVEGQAYSVMGLVPSNYCTEIL
YLHARGSSTTWKPLASAQTTDFKPFFTPRKAIELLKFGEVPISSEFDIAGLILYVGNTYL
CSNKKKQWLFLTDGSKFISEQGCEEQDCLLAVSISSAPTDEDSALFSYTLSGNTVGFSNL
VKRQKDETRQIWVAEATENSSYTLSNEIPRKSHLKEAAAAAERWASRSYHKIQELKERIL
CIVGNAGV
NT seq 3807 nt   +upstreamnt  +downstreamnt
atgaagatgctgaaattattggacaacgggatactggctgccagctcccaattttgcaaa
caggacttggaaggcctgttgctgtggaacagagttcaattgaaaaggcaagtgcagttt
tggagaatggatgatattaaaagaagtggaaatggagataccaatgtttgtgccacacct
ttccaatttgaaaccccaaaatccgttttgatgagtagcagtttgattatgaatgacatg
acttctacaccagaggaaaatacttcagtgcgagcagaaaaatgtttcaatgatggtggc
caattgccgttgtttcagactgggtcagggaggtcagtcacagtaagtaagggttccatt
aaaagggcaagtgcttttctcgagccaaggaacattgcaaaggaattggaagatgaagct
tatctcaatggtggttatgccacctcaatatttaaaactggaattgggaagtctatctta
gcaactgagaactcaagggaaagggcacaatttgtcttagaggctaaagaggctgtaaaa
caaggatatgaagactgtggaagtccattgccaatgtttcaaactggatctggaaaatct
gtattggtcagtgaaagttcggtgcaaaaggcaagagccgttctcaaggaagaagagcac
tacaagttggttaagacggacaaaaaaattgcagcctttgttccacctctcaagacaagc
cgtgcaagaacagtaaacgtatcttcaactggtgtttctcgagctgctaccttattgggc
ttggaggagaataccctttcaacacaattttttggacatgtgagtgataagttaggtacg
aagataactgttaagcggggaaatccagaacacaggcttgatgttgcatctacaagtgca
atttctagtggcactcataagggtacttatccaacagaaaaccccacacatatggataga
catcagcagtttggattttctaaaagtactacctctgatgctggtgagcattccatcagg
ttcagcactgcaggtggccgatcaatggctatctctgctgatgcactacaacgtgcgaga
agccttttgggtgattcagacttagtggtttctccaaatgattcaataggtcactctttg
gcatcagctacagagaagctaccaaaatcaactatttctccgaaaggagatgtatctaac
ttatcgcatggaactagagcaataggatatgctgtacctgacgcccctttgactaaaaaa
agtgctaatcagtttcatatgggaagggaatatcgtccaatcaatgaaattccaaaggtc
cccaagcctccctccagatgtttatctgaaggcaacaatgtgagtaatgctaaagacaag
acccagtggcaccatatgccagctggaccattggttgacatcactaactacatggctaca
tgttctggaaatacggaccgcttagcaaatggaaagagaataatcgggggaagaaactcc
atatctccattcaaacggccccgttcttccaggttcatcatgccaataaaaaacaacaaa
ctatcttctgctggagaatccatagtgccaccaatgcagatcagtccctgtaggacaatg
ctatctgcacgttatcctttccaacatcaaaggaaaaattacaaagaatattttggtggc
cctccttgcttcaaatatttgactgaacatgtaactgatgatgtgaagctcatggatgca
agaagagctgagaagtttaggtttcagcatacggatattggtgcagaagagtttcagaaa
atgctgctcacatgtggtgcttcattgtcatgtgcaactaaagaatgggtcagtaaccac
tataaatggattgtgtggaagcttgcttcacttgagagatgctacccaactagagctgct
ggtaaattcttgacggttgacaatgttcttgaggagcttaagtaccggtatgacagagaa
gtgaatcatggtcatcggtcagcaataaagaaaattttagaagggaatgcttcaccatct
ttgatgatggtcttgtgcatttcagctatttactcttgtcctgaccaaaataacaataag
ttggaggttaataaggtagatactaatgaagataacaatgacaaccaaagcttgtcagcc
actaatagaaacatgtctgcaaatattgaattaactgatggatggtattcacttgatgca
tcattggatatcacacttttggaacaactagagaaaagaaagcttttcgtagggcagaag
cttcggatatggggagcttctttatgtggttggtctgggcctgtgtcatttcacgaggtg
cctggtattgtcaaattagctgttcacataaatggcacctatcgtgctagatggaatgac
accttaggattctgcaagcatgttggactcccactggcattcaggtgcataaaagcttct
ggtggtagagttcctaggacactggttggaatcacaaggatatatcctgttctctaccgg
gaaaggttgcctgatggtcgttctgttgtgagatctgaaaggatggaaagaaaggcgctg
gaactataccaccagaggtaccacctctgctccacggcgccgcccactcgtcctaggtgg
acttgggcgcgcgactcgtcgagatggatggcttgtggtgccgtctcctgctctgcaact
gcgtccacctcctctgcctccaactctggctcgacgtcgtgcagcgcacagaacgtcgcc
attaggagagttggctcgtcgtcgtccacctacgccagagtatctaagatcacagaagat
attctgtttgaacaacaagaaaactgtcacagtactgatgataacgaggaaggggctaaa
attttcaacatgctagagcatgctgctgaacctgaatttatacttgcgggcatggctccg
gagcagttgaagcttttctcatcttatatagaaaagcgagagattgttaagcaaaacgaa
gtatctaagatggttgagaaggcccttgaagttgctggccttagtaaaagggatgttaca
ccatttttgaaagtgagagtgattggccttgtcaataaacattcagcttccacatccagt
aacaaggaagggctaataacaatttggaatcctactgagatgcagaaacataatcttgtg
gagggacaagcttattctgttatgggattggtgccttcgaactattgcactgaaatcctg
tacttgcatgctagaggatcatctacaacgtggaagcccttagcatcagctcagactaca
gattttaaaccattctttacccctcgtaaagcaattgaactcttgaaatttggtgaggtg
ccaatttcaagtgaatttgatattgcaggtcttattttatatgttggcaatacttattta
tgtagcaacaagaaaaagcagtggctctttttaacagatggatctaaatttatctctgaa
caagggtgtgaagagcaagattgtcttctagctgttagcatttcgtccgcacccactgat
gaagactctgcattatttagttatactctctctggaaacacagttggttttagtaatctg
gtcaaacgacagaaagacgagacgaggcaaatatgggtagctgaggcaacagagaactca
agctacactctttccaatgagattcctagaaaatctcacctaaaagaagctgcagctgcg
gctgagagatgggcttcaagatcttatcataaaattcaagagctaaaagaaaggatttta
tgtatagttggcaatgctggtgtctaa

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