Miscanthus floridulus: 136526335
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Entry
136526335 CDS
T10264
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog A-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
mflo Miscanthus floridulus
Pathway
mflo03440
Homologous recombination
mflo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
136526335
03460 Fanconi anemia pathway
136526335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136526335
03036 Chromosome and associated proteins [BR:
mflo03036
]
136526335
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136526335
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
136526335
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
136526335
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
136526335
FA (Fanconi anemia) pathway
Downstream FA components
136526335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
136526335
NCBI-ProteinID:
XP_066375132
LinkDB
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Position
2:78066642..78114657
Genome browser
AA seq
1268 aa
AA seq
DB search
MKMLKLLDNGILAASSQFCKQDLEGLLLWNRVQLKRQVQFWRMDDIKRSGNGDTNVCATP
FQFETPKSVLMSSSLIMNDMTSTPEENTSVRAEKCFNDGGQLPLFQTGSGRSVTVSKGSI
KRASAFLEPRNIAKELEDEAYLNGGYATSIFKTGIGKSILATENSRERAQFVLEAKEAVK
QGYEDCGSPLPMFQTGSGKSVLVSESSVQKARAVLKEEEHYKLVKTDKKIAAFVPPLKTS
RARTVNVSSTGVSRAATLLGLEENTLSTQFFGHVSDKLGTKITVKRGNPEHRLDVASTSA
ISSGTHKGTYPTENPTHMDRHQQFGFSKSTTSDAGEHSIRFSTAGGRSMAISADALQRAR
SLLGDSDLVVSPNDSIGHSLASATEKLPKSTISPKGDVSNLSHGTRAIGYAVPDAPLTKK
SANQFHMGREYRPINEIPKVPKPPSRCLSEGNNVSNAKDKTQWHHMPAGPLVDITNYMAT
CSGNTDRLANGKRIIGGRNSISPFKRPRSSRFIMPIKNNKLSSAGESIVPPMQISPCRTM
LSARYPFQHQRKNYKEYFGGPPCFKYLTEHVTDDVKLMDARRAEKFRFQHTDIGAEEFQK
MLLTCGASLSCATKEWVSNHYKWIVWKLASLERCYPTRAAGKFLTVDNVLEELKYRYDRE
VNHGHRSAIKKILEGNASPSLMMVLCISAIYSCPDQNNNKLEVNKVDTNEDNNDNQSLSA
TNRNMSANIELTDGWYSLDASLDITLLEQLEKRKLFVGQKLRIWGASLCGWSGPVSFHEV
PGIVKLAVHINGTYRARWNDTLGFCKHVGLPLAFRCIKASGGRVPRTLVGITRIYPVLYR
ERLPDGRSVVRSERMERKALELYHQRYHLCSTAPPTRPRWTWARDSSRWMACGAVSCSAT
ASTSSASNSGSTSCSAQNVAIRRVGSSSSTYARVSKITEDILFEQQENCHSTDDNEEGAK
IFNMLEHAAEPEFILAGMAPEQLKLFSSYIEKREIVKQNEVSKMVEKALEVAGLSKRDVT
PFLKVRVIGLVNKHSASTSSNKEGLITIWNPTEMQKHNLVEGQAYSVMGLVPSNYCTEIL
YLHARGSSTTWKPLASAQTTDFKPFFTPRKAIELLKFGEVPISSEFDIAGLILYVGNTYL
CSNKKKQWLFLTDGSKFISEQGCEEQDCLLAVSISSAPTDEDSALFSYTLSGNTVGFSNL
VKRQKDETRQIWVAEATENSSYTLSNEIPRKSHLKEAAAAAERWASRSYHKIQELKERIL
CIVGNAGV
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgctgaaattattggacaacgggatactggctgccagctcccaattttgcaaa
caggacttggaaggcctgttgctgtggaacagagttcaattgaaaaggcaagtgcagttt
tggagaatggatgatattaaaagaagtggaaatggagataccaatgtttgtgccacacct
ttccaatttgaaaccccaaaatccgttttgatgagtagcagtttgattatgaatgacatg
acttctacaccagaggaaaatacttcagtgcgagcagaaaaatgtttcaatgatggtggc
caattgccgttgtttcagactgggtcagggaggtcagtcacagtaagtaagggttccatt
aaaagggcaagtgcttttctcgagccaaggaacattgcaaaggaattggaagatgaagct
tatctcaatggtggttatgccacctcaatatttaaaactggaattgggaagtctatctta
gcaactgagaactcaagggaaagggcacaatttgtcttagaggctaaagaggctgtaaaa
caaggatatgaagactgtggaagtccattgccaatgtttcaaactggatctggaaaatct
gtattggtcagtgaaagttcggtgcaaaaggcaagagccgttctcaaggaagaagagcac
tacaagttggttaagacggacaaaaaaattgcagcctttgttccacctctcaagacaagc
cgtgcaagaacagtaaacgtatcttcaactggtgtttctcgagctgctaccttattgggc
ttggaggagaataccctttcaacacaattttttggacatgtgagtgataagttaggtacg
aagataactgttaagcggggaaatccagaacacaggcttgatgttgcatctacaagtgca
atttctagtggcactcataagggtacttatccaacagaaaaccccacacatatggataga
catcagcagtttggattttctaaaagtactacctctgatgctggtgagcattccatcagg
ttcagcactgcaggtggccgatcaatggctatctctgctgatgcactacaacgtgcgaga
agccttttgggtgattcagacttagtggtttctccaaatgattcaataggtcactctttg
gcatcagctacagagaagctaccaaaatcaactatttctccgaaaggagatgtatctaac
ttatcgcatggaactagagcaataggatatgctgtacctgacgcccctttgactaaaaaa
agtgctaatcagtttcatatgggaagggaatatcgtccaatcaatgaaattccaaaggtc
cccaagcctccctccagatgtttatctgaaggcaacaatgtgagtaatgctaaagacaag
acccagtggcaccatatgccagctggaccattggttgacatcactaactacatggctaca
tgttctggaaatacggaccgcttagcaaatggaaagagaataatcgggggaagaaactcc
atatctccattcaaacggccccgttcttccaggttcatcatgccaataaaaaacaacaaa
ctatcttctgctggagaatccatagtgccaccaatgcagatcagtccctgtaggacaatg
ctatctgcacgttatcctttccaacatcaaaggaaaaattacaaagaatattttggtggc
cctccttgcttcaaatatttgactgaacatgtaactgatgatgtgaagctcatggatgca
agaagagctgagaagtttaggtttcagcatacggatattggtgcagaagagtttcagaaa
atgctgctcacatgtggtgcttcattgtcatgtgcaactaaagaatgggtcagtaaccac
tataaatggattgtgtggaagcttgcttcacttgagagatgctacccaactagagctgct
ggtaaattcttgacggttgacaatgttcttgaggagcttaagtaccggtatgacagagaa
gtgaatcatggtcatcggtcagcaataaagaaaattttagaagggaatgcttcaccatct
ttgatgatggtcttgtgcatttcagctatttactcttgtcctgaccaaaataacaataag
ttggaggttaataaggtagatactaatgaagataacaatgacaaccaaagcttgtcagcc
actaatagaaacatgtctgcaaatattgaattaactgatggatggtattcacttgatgca
tcattggatatcacacttttggaacaactagagaaaagaaagcttttcgtagggcagaag
cttcggatatggggagcttctttatgtggttggtctgggcctgtgtcatttcacgaggtg
cctggtattgtcaaattagctgttcacataaatggcacctatcgtgctagatggaatgac
accttaggattctgcaagcatgttggactcccactggcattcaggtgcataaaagcttct
ggtggtagagttcctaggacactggttggaatcacaaggatatatcctgttctctaccgg
gaaaggttgcctgatggtcgttctgttgtgagatctgaaaggatggaaagaaaggcgctg
gaactataccaccagaggtaccacctctgctccacggcgccgcccactcgtcctaggtgg
acttgggcgcgcgactcgtcgagatggatggcttgtggtgccgtctcctgctctgcaact
gcgtccacctcctctgcctccaactctggctcgacgtcgtgcagcgcacagaacgtcgcc
attaggagagttggctcgtcgtcgtccacctacgccagagtatctaagatcacagaagat
attctgtttgaacaacaagaaaactgtcacagtactgatgataacgaggaaggggctaaa
attttcaacatgctagagcatgctgctgaacctgaatttatacttgcgggcatggctccg
gagcagttgaagcttttctcatcttatatagaaaagcgagagattgttaagcaaaacgaa
gtatctaagatggttgagaaggcccttgaagttgctggccttagtaaaagggatgttaca
ccatttttgaaagtgagagtgattggccttgtcaataaacattcagcttccacatccagt
aacaaggaagggctaataacaatttggaatcctactgagatgcagaaacataatcttgtg
gagggacaagcttattctgttatgggattggtgccttcgaactattgcactgaaatcctg
tacttgcatgctagaggatcatctacaacgtggaagcccttagcatcagctcagactaca
gattttaaaccattctttacccctcgtaaagcaattgaactcttgaaatttggtgaggtg
ccaatttcaagtgaatttgatattgcaggtcttattttatatgttggcaatacttattta
tgtagcaacaagaaaaagcagtggctctttttaacagatggatctaaatttatctctgaa
caagggtgtgaagagcaagattgtcttctagctgttagcatttcgtccgcacccactgat
gaagactctgcattatttagttatactctctctggaaacacagttggttttagtaatctg
gtcaaacgacagaaagacgagacgaggcaaatatgggtagctgaggcaacagagaactca
agctacactctttccaatgagattcctagaaaatctcacctaaaagaagctgcagctgcg
gctgagagatgggcttcaagatcttatcataaaattcaagagctaaaagaaaggatttta
tgtatagttggcaatgctggtgtctaa
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integrated database retrieval system