Miscanthus floridulus: 136526908
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Entry
136526908 CDS
T10264
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136526908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136526908
03110 Chaperones and folding catalysts [BR:
mflo03110
]
136526908
03029 Mitochondrial biogenesis [BR:
mflo03029
]
136526908
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mflo04147
]
136526908
Enzymes [BR:
mflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
136526908
Messenger RNA biogenesis [BR:
mflo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
136526908
Chaperones and folding catalysts [BR:
mflo03110
]
Heat shock proteins
HSP60 / Chaperonin
136526908
Mitochondrial biogenesis [BR:
mflo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
136526908
Exosome [BR:
mflo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
136526908
Exosomal proteins of other body fluids (saliva and urine)
136526908
Exosomal proteins of breast cancer cells
136526908
Exosomal proteins of colorectal cancer cells
136526908
Exosomal proteins of bladder cancer cells
136526908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
PhaC_N
Motif
Other DBs
NCBI-GeneID:
136526908
NCBI-ProteinID:
XP_066375578
LinkDB
All DBs
Position
19:4642263..4647310
Genome browser
AA seq
579 aa
AA seq
DB search
MASTFGATCTVGLMAAPTGKNVRLQRRTNFRVKAAKELYFNKDGSAIKKLQTGVNKLADL
VGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAG
DGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAKALVEELRKLSKDVEDSELADV
AAVSAGNNYEIGNMIAEAMSKVGRKGVVTLEEGRSSENFLYVVEGMQFDRGYISPYFVTD
SEKMSVEYENCKLLLVDKKITNARDLINVLEEAIRGAYPILIIAEDIEQEALATLVVNKL
RGSLKIAAIKAPGFGERKTQYLDDIAILTGATVIRDEVGLSLDKADKSVLGTAAKVVLTK
ESTTIVGDGSTQEEVTKRVAQIKNLIEAAEQEYEKEKLNERIAKLAGGVAVIQVGAQTET
ELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAAKVDAIKDTLENDEQKVGAEIVRR
ALSYPLKLIAKNAGVNGSVVTEKVLSNDNFKYGYNAATGQYEDLMAAGIIDPTKVVRCCL
EHAASVAKTFLTSDVVVVDIKEPEAAPLANPMDNSGYGY
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgacattcggtgccacttgtacagttggccttatggctgctccaacagggaag
aatgtgcgccttcagaggaggactaacttcagagtaaaagcagccaaggagctgtacttc
aacaaggatggctcagctatcaagaagctccagactggagtcaataagcttgcagaccta
gttggagttacactcggaccaaagggaaggaatgtcgttttggagagcaagtatggctct
cctaggattgttaacgatggtgttacagttgcaagagaggttgagctggaggaccctgtg
gaaaacattggagctaaattggtcaggcaagctgcagctaagaccaatgatctagctgga
gatgggacaaccacctctgttgtccttgctcagggactgattgctgagggtgttaaggtt
gtggcagctggtgctaatcctgttcagattactcgtggtatcgagaaaacagcgaaagca
ctagttgaagaactacgtaagttgtctaaggatgttgaagatagcgagcttgcagatgtt
gctgcggttagtgctggcaacaactatgaaatcggtaacatgatagcagaggccatgagc
aaggttggtcggaagggtgtggttacccttgaagaggggaggagttctgagaactttctc
tatgttgtggagggaatgcagtttgaccgtggttatatctctccgtactttgtaacagac
agtgagaaaatgtctgtcgagtacgagaactgcaagctgcttttggttgacaagaagatc
accaacgcaagggatcttatcaacgttttggaagaagccatcagaggtgcatacccaatc
ctgataattgctgaggatattgagcaggaggctcttgctacccttgttgtcaacaagctt
agaggatcattgaagattgctgccatcaaagcccctggttttggagagcgcaagactcag
tacttggatgatattgccatccttactggagcaactgtaatcagagatgaagttgggctg
tcacttgacaaggctgacaaatcagtccttggaacagctgcaaaggttgttcttacaaaa
gagtcgacaacaattgttggtgacggcagcacccaggaagaagtgactaaaagggttgcg
cagattaaaaatctgattgaggcagcagaacaagaatacgaaaaggaaaaacttaatgag
aggatagcaaagcttgctggtggtgttgctgtcattcaggtgggagcacaaacagaaact
gaactaaaagagaagaagttgagagttgaggatgcgctaaatgcaactaaggctgccgtc
gaggaaggtattgttgttggtggagggtgcactcttttgcggcttgcagctaaagtcgat
gccatcaaggatacactggagaacgatgagcagaaggttggagctgaaatagtaaggagg
gccctgagctacccacttaaattgattgctaaaaacgctggtgtcaatggcagcgttgtc
actgagaaggtcctttctaacgataacttcaagtatggttacaatgctgctactggacag
tacgaggacttgatggctgctggtatcattgaccccaccaaggtggtgagatgctgcttg
gagcacgctgcgtcggtagccaagaccttcctgacatcagatgttgtggtcgtcgatatc
aaggagccggaggccgcgccccttgctaacccgatggacaactctggctatggatactga
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