Miscanthus floridulus: 136527071
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Entry
136527071 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K12857
Prp8 binding protein
Organism
mflo Miscanthus floridulus
Pathway
mflo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136527071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mflo03041
]
136527071
Spliceosome [BR:
mflo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
136527071
Complex C
U5 SnRNP specific factors
136527071
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
NBCH_WD40
WD40_RFWD3
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF12
eIF2A
Beta-prop_HPS5
Beta-prop_Nup120_160
WD_LRWD1
Beta-prop_IP5PC_F
PEP5_VPS11_N
WDR54
Motif
Other DBs
NCBI-GeneID:
136527071
NCBI-ProteinID:
XP_066375788
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Position
19:complement(92263299..92266594)
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AA seq
343 aa
AA seq
DB search
MFSAPGNNSLALVAPRPGMELANVQHPNQAPGPGGKQRTSSLEAPIMLLTGHQSAIYCMK
FNPAGTVIASGSHDRDIFLWYVHGECKNFMVLRGHKNAILDLQWTTDGTQIISASPDKTV
RVWDVETGKQVKKMTEHSSFVNSCCPARKWPPLVVSGSDDGTAKLWDLRQRGAIQTLPDK
YQITAVSFSEAADKVFTGGLDNDVKWWDLRKNEVTEYLKGHQDMITGMQLSPDGSYLLTN
AMDNELKIWDLRPYAPENRNIKTLTGHQHNFEKNLLKCSWSPDNRKVTSGSADRMVYIWD
TTSRRILYKLPGHNGSVNETAFHPTEPIIGSCSSDKQIYLGEL
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgttctcggctccaggcaacaattctttggctcttgttgccccacgaccagggatggag
ttggctaatgttcaacatccaaatcaggctccggggcctggaggcaaacagcgcacatcc
agcctggaggcaccgataatgctacttacaggtcaccagagtgctatctactgcatgaag
ttcaatcctgcggggactgtgatagcatcaggttcccatgacagggatatcttcttatgg
tatgtccatggtgaatgtaagaacttcatggtactgagagggcacaagaatgctattctt
gaccttcagtggactactgatgggacccagatcatctctgcaagtcctgacaagactgtg
agggtctgggacgttgagactggcaaacaagttaagaagatgactgagcactcatcattc
gtcaactcatgctgcccagcacggaagtggccacctcttgtggttagcggttcagatgat
ggtacagcaaagctgtgggacttgcgtcagagaggtgcgatacaaactcttcccgacaaa
tatcagatcacagccgttagcttctcagaggcagcagataaggtattcactggtggcctg
gacaacgacgtcaagtggtgggatcttcgcaagaatgaagtgacagaatatctcaaagga
catcaggacatgatcactgggatgcagcttagtcctgatgggtcttacctcctcaccaat
gcaatggataacgagctcaagatctgggatctgcgcccttacgcaccagagaacaggaac
atcaagactcttacaggtcaccagcataactttgagaagaacctgctgaagtgtagctgg
tcgccggataaccgcaaggtcacttctgggagcgcagaccgcatggtctacatctgggac
acaacatcaaggcgcatcctgtacaagcttcctgggcacaatggttctgtcaatgagact
gctttccatcccactgagccgatcattggatcttgcagcagcgacaagcagatctatctt
ggggaactttaa
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