Miscanthus floridulus: 136527136
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Entry
136527136 CDS
T10264
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
mflo Miscanthus floridulus
Pathway
mflo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136527136
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mflo01009
]
136527136
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mflo03041
]
136527136
Protein phosphatases and associated proteins [BR:
mflo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
136527136
Spliceosome [BR:
mflo03041
]
Common components
Common spliceosomal components
SR proteins
136527136
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GFIT
Motif
Pfam:
RRM_1
RRM_5
RBD_DGKtheta
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
136527136
NCBI-ProteinID:
XP_066375853
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Position
19:110556758..110561516
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AA seq
280 aa
AA seq
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MADSPRRRYSRSPSYSRGHPKARSRSQSPARSQSRSPVPDPRSQARSRSRSHEREEAVNH
GNTLYVTGLSSRVTERDVKDYFSKHGRVVGCHVVLEPHTRVSRGFAFVTMDTVEEAERCI
KYLNDSVMEGRNITVEKSRRGRPRTPTPGSYLGHRYERRERGRFRRGYGGGRDEYYGNGG
GYGYRRSPPPMYSSSYRESRDYYPSYRDSRDYYPSYKDSRDYSPHRDPRDYYESRGGGRG
YSPPPYGGGRSRRERSISPYRMPERGYGGGRRAGGGGYDR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggccgattccccgcgcaggaggtactcgaggtccccttcatacagcagggggcaccca
aaagcgaggtcaaggtcacaatctccagctcggtctcagtctaggtcgcctgtgcctgat
cctagatctcaggcgaggtcaaggtctagaagccatgagagggaggaggctgttaaccac
ggaaatactctgtatgtgactgggctctcttccagggtgactgaaagggatgttaaagat
tatttctctaagcatggaagggtggttggttgccatgttgttcttgaaccccatacacgt
gtttcccgtggatttgcctttgtcaccatggacactgttgaagaagctgagcgttgcatc
aagtatcttaatgattctgtaatggaaggtcgaaacatcacagttgagaagtcacgccgt
ggtcgcccaaggacaccaactcctggaagctatcttggccatcggtacgagcgtagagag
cgtgggagattccgtagaggctatggtggtgggcgtgatgagtattatggcaatggcggt
ggctatggctaccgcaggtccccgcctcccatgtactcttcctcctacagggagagccgg
gactattatccctcctacagggacagccgggactattatccctcctacaaggacagccgg
gactactctccccacagggaccctcgagactactacgaaagcaggggcggcggccggggc
tactccccgcctccttatggcggtggtaggtcaaggagggagcgatcgatttcgccgtat
cggatgccagaaaggggctacggtggaggccgccgggcgggcggcggtggctatgacagg
taa
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