Miscanthus floridulus: 136527310
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Entry
136527310 CDS
T10264
Name
(RefSeq) TBC domain-containing protein C1952.17c-like
KO
K18469
TBC1 domain family member 5
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mflo04131
]
136527310
Membrane trafficking [BR:
mflo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
136527310
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
MAT1-1-2
Motif
Other DBs
NCBI-GeneID:
136527310
NCBI-ProteinID:
XP_066376094
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All DBs
Position
19:complement(117240256..117245061)
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AA seq
741 aa
AA seq
DB search
MTMPGSPARPSFSALRGARWRADLGVIPGSAAVSTDELRRAAADSRRRYANLRRRLLIDP
HLSKDEEGAPDLIVENPLSQSPGSTWGQYFRNAELEKMLNQDLSRLYPELGDFFQTSTCQ
SMLGRILLVWSLRYPEFGYRQGMHELLAPLLYVLHADVQHFRQVRDLHEELLGDDFDGQT
FPDRSKLNRSDRKNNVEGRTAKIRSLADLDPDTRDLFLINDAYGAEGELGIILSEKFMEH
DAYSMFENLMNGAQGVVAITDFYFLSPAPESSMGLTPVREASSAIYHLLASVDSSLHSHL
VELGVEPQYFALRWLRVLFGREFSLDSLLFIWDEIFSSPNHSYCTDICSGADYQFKVLCS
PRGALILSMAVSMMLHLRSSLLGSEHATSCLVRLLNFPEDIDLKSLIEKAKLLQSFALEA
NLPSSPMRGNSLLTTPNYWEETWKILQPSMDQKGGGIFKMKGRGFLRRSLSNTESNVSRS
RAANFENNDMTSTRQSTTDELHNADVVPAELINSAPHMLLEKQKHHVGKGTAEAIESNSK
NACETGQHDGYCSTSGEIRDPLGAASGYLSRSSSTTLSCGTEYDHDTHHLEEPCGPCDDR
VINEPDPLFVHNGRTDEAATTDRTSGIVDTYPVQQRRLCSVDGKPKIKDDQNSTSDKGGQ
KETLAICSITNVADKELSRTLRSLGESMVENIQDIEMLFQPNSLSTSVEKLEKAIPRSTE
QAKAVAALKELRKISDLLRQI
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgccgggctctccggcgaggccgagcttctcggccctccgcggtgcccggtgg
cgcgccgatctcggcgtcatccccggctccgccgccgtatccaccgacgagctccgccgc
gccgctgccgactcccgccgaagatatgctaatctgcggcgaaggctgctaatagatccc
catctttccaaggatgaagaaggtgctcctgacttgattgtggagaatccactctcgcag
agcccagggagcacttggggccaatatttcaggaatgcggagcttgagaaaatgcttaac
caagatctgtcccgcctataccctgaattgggggacttcttccaaacaagcacatgccag
tctatgcttggacgtatattgttagtatggagcctcagatacccagagtttggttacaga
caaggaatgcatgaactcttagctcctcttctctatgtacttcacgctgatgtgcagcac
ttcagacaagtcagggaccttcatgaagaacttttgggtgatgattttgatggtcaaact
tttccagatcgttcaaagctgaacagaagtgacaggaaaaacaatgttgagggtagaaca
gctaaaattagaagtttggctgaccttgatcctgatactagagatcttttcttgatcaat
gatgcatatggagcagagggtgagctgggtattattttatcagaaaagtttatggagcat
gatgcttactctatgtttgagaatttgatgaacggtgcacaaggagtggttgctatcact
gacttctattttctgagtcctgccccagaatcaagcatgggtttaacacctgtaagagag
gcatcatctgcaatatatcacttgcttgctagtgttgattcctctcttcatagtcacctt
gtggagttaggagttgaacctcagtactttgcattaagatggctacgcgtcctatttggt
cgtgaattttcacttgacagtcttctgtttatttgggatgagatcttctcttctcctaac
cattcttattgtaccgatatctgtagtggggcagattatcagtttaaagtgttatgttct
cctcgtggtgcactgattttgtcgatggcagtatcaatgatgcttcatctcagatcctcc
ttgttagggagtgagcatgcgacttcttgcctagtgaggttgttaaattttccagaagat
attgacttaaagagcttaattgagaaagccaagttactgcaatcttttgcccttgaagca
aatcttccttcatccccaatgagaggaaattctctcttgactacacccaactattgggaa
gagacatggaagattctccagccatcaatggaccaaaagggtggtggtatcttcaagatg
aagggaaggggcttcttgagaagaagcttgtctaacactgagtcgaatgtttccagaagc
agggctgctaattttgaaaacaacgatatgacttcaactaggcagtccactactgatgaa
cttcacaatgctgatgtagttcctgcggagctgataaatagtgcgccacacatgctatta
gaaaaacaaaagcatcatgttggtaaaggtactgcagaggctattgagagtaattcaaag
aatgcatgtgagacaggccagcatgatggttactgctcaacttcaggtgaaattagagat
cctcttggagcagctagtgggtatttatcgaggagcagcagtaccactttgtcatgtggc
actgaatacgatcatgatacccatcatctggaagaaccatgtggtccctgtgatgacaga
gtgattaatgaacctgatccactctttgtgcacaatggtagaactgatgaagcagcaaca
acagatcgaacatctggaatagtggatacttatccagttcaacagcgtagactgtgttct
gttgatgggaagccgaaaataaaagatgaccaaaattccactagtgataaaggtggccaa
aaagaaacattggcaatatgttcaataacaaatgtggctgataaagagttgagcagaaca
ttaagatctcttggtgaatctatggttgagaacatacaggatatcgagatgctatttcaa
ccaaattcactatcaacttcagtggagaaacttgagaaagcaattcctagaagcacagag
caagctaaggcagtagcagctctaaaagaactcaggaagatcagtgaccttttacgtcaa
atctaa
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