Miscanthus floridulus: 136527431
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Entry
136527431 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
mflo Miscanthus floridulus
Pathway
mflo03015
mRNA surveillance pathway
mflo04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136527431
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
136527431
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mflo01009
]
136527431
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136527431
03036 Chromosome and associated proteins [BR:
mflo03036
]
136527431
Protein phosphatases and associated proteins [BR:
mflo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
136527431
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
136527431
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
136527431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EZ
HEAT_EF3_N
Vac14_Fab1_bd
Htt_N-HEAT_1
PDS5
TOR1L1_N
Cnd1
CLASP_N
TAF6_C
Adaptin_N
CEP104-like_TOG
TPR_TNPO3_IPO13_3rd
DUF3102
Motif
Other DBs
NCBI-GeneID:
136527431
NCBI-ProteinID:
XP_066376260
LinkDB
All DBs
Position
19:10228841..10233850
Genome browser
AA seq
587 aa
AA seq
DB search
MAMIDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDE
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGAQMKES
DIVDWFIPVVKRLAAGEWFTARVSSCGLFHIAYPSASDQLKTELRTIYGQLCQDDMPMVR
RAAASNLGKFAATVEQNHLKTEIMSIFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRADLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPQISIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLEDKVFSIRDAAANNLKRLAEEFGPEWAMQHIIPQV
LEKINNPHYLYRMTILQAISLLAPVMGAEITCQKLLPVVINSSKDRVPNIKFNVAKVLQS
LIPILDQSVVEKTVKPCLVELSEDPDVDVRYYANQALQACDQMMVSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatgattgatgagcctctgtatccaattgctgtactgattgacgagcttaagaat
gaggacattcagttgcgtctaaactccattagaagactttcgacaattgcacgggctctt
ggagaagaaagaaccaggaaggaactgattccctttcttagtgaaaacaatgacgatgaa
gacgaggttcttcttgcaatggctgaggaattgggtgtgttcattccttatgttgggggt
gtagaacatgctcatgttttgcttccacctttggagacattgtgtacagtggaggaaact
tgtgtccgtgataaggcagttgaatctctgtgccgtattggtgcacaaatgaaggaatct
gacattgtcgactggtttattccagtagtaaagaggctagctgctggtgagtggtttaca
gctcgtgtatcgtcctgtggtcttttccacatagcctatccaagtgcgtcggaccaattg
aaaacagaattgaggactatctatggtcagttatgtcaggatgacatgcctatggtcaga
agagcagctgcatcaaatcttggaaagtttgcagccacagttgaacagaatcatttgaag
acagaaataatgtcgatatttgatgatttaacccaagatgatcaagattcagtgcgtttg
ttggctgttgaaggttgtgctgctcttggtaaattattggaaccacaagattgtgtagca
cacattcttccagtcattgtcaatttctcccaggataaatcatggcgtgttcgttatatg
gtcgccaatcaattatatgagctatgtgaggctgttggccctgagcctacaagagctgat
ttggtgcctgcatatgttcgtctccttcgtgataatgaggctgaagtgcggatagcagct
gctggaaaagtaactaagttctgtcgcatattaaatccacagatttcaatccaacatatt
cttccgtgcgttaaggaattgtcatcagattcatcccagcatgtccgttcagctttagcc
tcagtcattatgggaatggctcctgtactgggaaaggatgctaccattgaacagcttctt
ccaatttttctctctttgctgaaggatgaatttcctgatgttcgacttaacataatcagc
aaacttgatcaagttaatcaggttattggaattgacttgctatctcaatcactgctacca
gccatcgtagaacttgcagaggataggcactggagagtccggcttgcaataattgagtac
atcccattgttggcgagtcagctaggtgttgggttttttgatgacaagctgggggcactc
tgcatgcaatggttggaagataaggtcttttcaatcagagatgctgccgctaacaacttg
aagcgccttgcagaagagttcggtccagagtgggcaatgcagcatataattcctcaggtg
ctggagaagatcaacaatccacactatttgtaccgcatgacgattctgcaggctatctcc
ttgctagctcctgtcatgggtgcagaaatcacttgtcaaaagctgcttccagtcgtcatt
aattcttcaaaggacagggttcctaacatcaagttcaatgttgcaaaagtactacagtca
cttataccgatccttgatcaatctgttgtggagaagaccgtgaaaccatgcctggttgag
ctcagtgaggaccctgatgtcgatgtaagatactatgcaaatcaggcactgcaggcgtgc
gatcaaatgatggtgtcaagctaa
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