Miscanthus floridulus: 136527956
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Entry
136527956 CDS
T10264
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mflo Miscanthus floridulus
Pathway
mflo00040
Pentose and glucuronate interconversions
mflo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
136527956
Enzymes [BR:
mflo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
136527956
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
136527956
NCBI-ProteinID:
XP_066376924
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Position
19:complement(80028195..80030266)
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AA seq
450 aa
AA seq
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MEEGFRWSRPGSFVLCLVFFLLSAAVSEANIGDFDDYWRQRKLMADAAAEATYKHDPLEV
TNQLNRAVHRSVEKEDMMSTRREMMGQKKGKLSGPCTATNPIDRCWRCRQDWATDRKRLA
RCAKGFGRNTTGGLAGKFYVVTDGTDDDVVNPRPGTLRWAVIQIEPLWITFAKTMIITLK
EELIIRGDKTIDGRGAQVRIANGAQLTVQFSNNVIIHNIHINDIMSSNKNGGNIRDSPDH
FGWRTVSDGDGITVFGSTNVWLDHLSLSNCQDGLIDVIAKSTGVTISNCHMTNHNDVMLF
SSSDKHPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSKAPTI
VSQGNRYIAPPNLAAKLVTKHHDAPESEWKNWVWHSENDLFMEGANFTVSGGQINRQFHK
KDLIKPKTGSYVTRLTRYAGSLACRPGKPC
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggggttccgatggagcagaccgggctctttcgtcctgtgcttggtcttcttc
ttactgtccgcggccgtgtcggaggccaacatcggcgacttcgacgactactggcggcag
cgcaagctgatggccgacgccgcggcggaggccacgtacaagcatgacccgctcgaggtc
accaaccaactcaaccgcgcagtccacagatccgtcgagaaggaggacatgatgagcacg
aggcgggagatgatggggcagaagaagggtaagctcagcgggccgtgcacggcgacgaac
ccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaagcggctggcg
cggtgcgccaaggggttcgggcgcaacaccaccggcggacttgccggcaagttctacgtg
gtgacggacggcaccgacgacgacgtggtgaacccgcgccccggcacgctccggtgggcc
gtcatccagatcgagccgctgtggatcaccttcgccaagacgatgatcatcacgctcaag
gaggagctcatcatccgcggcgacaagaccatcgacggccgcggcgcgcaggtgcgcatc
gccaacggcgcgcagctgacggtgcagttctccaacaacgtcatcatccacaacatccac
atcaacgacatcatgtcctccaacaagaacggcggcaacatccgggactcgccggaccac
ttcggctggcgcaccgtctccgacggcgacggcatcaccgtcttcgggtccaccaacgtg
tggctggaccacctctccctgtccaactgccaggacgggctcatcgacgtcatcgcaaag
tccaccggcgtcaccatctcgaactgccacatgaccaaccacaacgacgtcatgctcttc
agctccagcgacaagcatcccgaggaccagatcatgcagatcaccgtcgccttcaaccac
ttcggcagaggcctcgtgcagagaatgccaaggtgccgttggggattcttccacgtggtg
aacaacgactacacgcactggctcatgtacgccatcggcggcagcaaggccccgaccatc
gtcagccagggcaaccgctacatcgcaccgccaaaccttgcggcgaagctggtcaccaag
caccatgacgcgccggagtcggagtggaagaactgggtgtggcactcggagaacgacctc
ttcatggagggcgccaacttcaccgtcagcggcggccagatcaacaggcagttccacaag
aaggacctcatcaagcccaagaccgggtcctacgtcaccaggctcacgcgatacgccggc
tccctcgcctgcaggcccggcaaaccctgctag
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