Miscanthus floridulus: 136528251
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Entry
136528251 CDS
T10264
Name
(RefSeq) ubiquitin domain-containing protein DSK2a-like
KO
K04523
ubiquilin
Organism
mflo Miscanthus floridulus
Pathway
mflo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
136528251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mflo04131
]
136528251
03051 Proteasome [BR:
mflo03051
]
136528251
Membrane trafficking [BR:
mflo04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
136528251
Proteasome [BR:
mflo03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
136528251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
Ubiquitin_5
Dsc3_N
Rad60-SLD_2
TBK1_ULD
TSC22
HEAT_HEATR1
Motif
Other DBs
NCBI-GeneID:
136528251
NCBI-ProteinID:
XP_066377284
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All DBs
Position
2:116017420..116022452
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AA seq
580 aa
AA seq
DB search
MASGGEGAGSGESPPAASVEAAAGEATLHIRCANGSKFTVQTDLGATVGAFKEVVARSCD
VPAPQQRLIYKGRILKDEQTLESYGVETNHTIHFVRGVAPPAASSAPAAASPLASSTPSS
GPADGLGGLFPGLGAPGSGRPSGIFGSGFPELEQVEQHLSQNPNLMREIMNMPAMQNLMN
NPDLIRNMIMSNPQMREIMDQNPDLAHVLNDPSVLRQTLEAARNPEIMREMMRNTDRAMS
NIESSPEGFNMLRRMYETVQEPLLNATTMGGEGNTASNPFSALLGNQGSNQPGQGQPATN
APTTGSESTTGTPAPNTNPLPNPWSTNAGSAQGATRSSASGNARTGASGGVGGTGDTGGL
GGLGSPDLSTLLGGLAGNPRIGAAGGLGGLGSPDLGSMLGGSPDVSLFNQMLQNPAMMQM
MQSIMSDPQTMNQLLNFNPNTRNLMESNTQMREMLQNPEFLRQLTSPETLQQLLSFQQSL
LGQLGQLQPSQGGNNAGSATGTRANPSLDTLMSMLSGLGSGGALGVPNTSNVPPEELYAT
QLTQLQEMGFIDTSENIQALVATAGNVHAAVERLLGNLGQ
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcggaggcgagggcgcagggagcggcgagtcccctcccgctgcctcagtggag
gcggcagcgggggaggcgacgctgcacatccggtgcgcgaacggctccaagttcacggtg
cagacggacctgggcgccacggtgggcgcgttcaaggaggtcgtagccaggagctgcgac
gtgccggcgccgcagcagcgcctgatctacaagggccgcatcctcaaggacgagcaaacc
ctagaaagctacggtgttgagacaaatcacacaattcactttgtgcgtggtgtcgcccca
ccagctgcatccagtgcacctgctgctgctagcccccttgcttcatctactcctagtagt
ggccctgcagatggcctgggaggcctatttccaggtcttggtgctccaggaagtggtaga
ccatcaggtatatttgggtcaggatttccagaattagagcaagttgagcagcatttaagc
cagaatcccaacttgatgagggagataatgaatatgccagcgatgcaaaatctcatgaat
aaccctgatttaatacgcaatatgatcatgagcaacccacaaatgcgcgagatcatggat
cagaatcctgatcttgcccatgtgctcaatgacccaagtgtcctccgccaaaccctcgaa
gctgctaggaaccctgaaatcatgagagagatgatgcggaacacagacagagctatgagc
aacattgagtcttctcctgaaggttttaatatgctccggcgcatgtatgaaactgtccag
gagccacttctaaatgcaacaacaatgggcggggaaggaaacacagcctcaaacccattt
tcagctcttcttggcaatcaggggtctaaccaacctggtcaaggtcaacctgcaacaaat
gctcccactactggttcagagtcgacaactggaaccccagctccaaatactaatccacta
ccaaatccctggagcaccaatgctgggagtgcacaaggagcaacacggtccagtgctagt
ggcaacgcaagaactggtgcttctggtggcgttggaggcactggtgacactggtggactg
ggagggttgggttcaccagatttgagtactttgcttggtggtcttgctggcaatccaaga
attggtgctgctggcggtttaggaggtttgggttcaccagatttggggagtatgcttggt
ggttcacctgatgtttctcttttcaatcagatgttgcaaaaccctgcaatgatgcagatg
atgcagagcattatgtctgacccacagaccatgaaccagttgcttaacttcaacccaaat
acacgcaacctgatggaatcaaacactcagatgagggaaatgcttcaaaatccagaattt
cttcgccagctgacatcgcctgagactttgcagcaattactctcatttcagcagtcttta
ttaggacagcttggtcaacttcaacctagccagggtggcaacaatgcaggcagtgccaca
ggtacgcgggcaaaccctagccttgacaccttgatgagcatgctcagcgggcttggttcg
ggaggtgccctaggtgttccaaatacttccaatgtgccaccggaggagctctatgccaca
cagcttactcagctccaagaaatgggtttcattgacacctcggagaacattcaagcactg
gtcgctaccgctgggaatgtacatgctgccgtggagcgtcttctcgggaacctcggccag
tag
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