Miscanthus floridulus: 136528271
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Entry
136528271 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase makorin-like
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136528271
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136528271
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136528271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
zf-CCCH_2
zf-CCCH_3
zf-C3HC4
Torus
zf-RING_2
RING_XB3-XBAT31
zf-RING_5
zf-C3HC4_4
zf-CCCH_RBM22
zf-RING_UBOX
zf-CCCH_PARP12
zf-CCCH_DUS3L
zf-rbx1
zf-C3HC4_2
IBR_1
zf-UDP
Motif
Other DBs
NCBI-GeneID:
136528271
NCBI-ProteinID:
XP_066377297
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All DBs
Position
19:49019858..49026348
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AA seq
368 aa
AA seq
DB search
MSTKKVLCKFFMHGACLKGEYCEFSHNWSDQANNVCTFYLKGACSYGSRCRYDHVKVSRN
PTVPPPPPTSSAARRVTSTSLQLLSSSQPHTGHQTDSSNQRHQISVDVLAHSASKSAWRN
DFQHDIVSDDGIDWSSNRNLLNQTSLKPADLPICSFAAAGNCPXKGCPQIHGDLCATCGK
MCLHPHRPDEREELTKFCEKNHKRLEALKRSQEIECSVCLDRVLSKPTAAERKFRLLSEC
DHPFCIACIRNWRSNSAASGMDVNSALRACPICRKLSYYGIPSVLWYFSKEEKEEITESY
KSKLKSIDCKYFDFGTGSCPFGTSCFYRHAYRDGRLEEVVLWHLDADDGSTVIAKDIRLL
DFLSRMHL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactaagaaggttctttgcaagttcttcatgcatggagcttgcttgaaaggagag
tactgtgaattctcccacaactggagtgatcaagcaaataatgtttgcacattctacctg
aaaggtgcatgctcgtatggtagccgttgcagatatgaccatgtcaaagtttctcgtaac
cccacagtgccaccaccacccccaacatcaagtgctgcaagacgtgtcacatctacttct
cttcaacttttaagttccagtcaacctcacacgggacaccaaactgattcaagcaaccaa
agacatcagatatctgtggatgtgttggcacattctgccagtaagtctgcatggagaaat
gattttcaacatgacattgtttcagatgatggaattgactggtcctctaatcgaaatttg
ctaaaccagacgtcattgaaacctgcagatctgcctatttgttcttttgctgctgctggt
aattgtcctnngaaagggtgccctcaaatacatggagatctgtgtgcaacctgtggaaaa
atgtgtttgcatcctcatcgtcctgatgagagggaggagcttaccaagttttgtgagaaa
aatcacaaacgccttgaagctctgaaacgcagccaagaaatagaatgcagtgtatgtttg
gatcgtgtgctttcaaagcctactgctgctgaaaggaagttcagactgttatccgaatgt
gatcatcctttctgtattgcatgcattagaaattggcgtagcaattctgctgcatctggt
atggatgtgaactcagcactgagggcttgtccaatatgtcggaaactttcatactatggc
attccaagtgttctttggtacttctcaaaggaagagaaagaggagatcactgaaagctac
aaatccaagctcaagtctattgattgcaagtacttcgactttgggactggctcatgcccc
tttggaacaagttgtttctacaggcatgcctacagagatggccgcttggaagaggttgta
ctgtggcatcttgatgctgatgatggaagtacagtaattgcaaaagatatcaggttattg
gacttcctcagtaggatgcatctttag
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