Miscanthus floridulus: 136528287
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Entry
136528287 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mflo04131
]
136528287
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mflo04812
]
136528287
Enzymes [BR:
mflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
136528287
Membrane trafficking [BR:
mflo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
136528287
Cytoskeleton proteins [BR:
mflo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
136528287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
NPHP3_N
AAA_16
AAA_5
Vps4_C
AAA_22
AAA_14
TIP49
Mg_chelatase
DUF815
AAA_2
AAA_25
IstB_IS21
RNA_helicase
Guanylate_kin
nSTAND3
DUF2333
AAA_24
Motif
Other DBs
NCBI-GeneID:
136528287
NCBI-ProteinID:
XP_066377326
LinkDB
All DBs
Position
19:10218265..10224926
Genome browser
AA seq
490 aa
AA seq
DB search
MSFLRLLADSFSSLLFSSRGGGAPMDAAGAAPSPAVVVGERVAVKLRGYFDLAKEEIDKA
VRAEEWGLPDDATAHYRNAMRVMLEAKAARVPDAVSSSERGQVRVYQEKIAKWQAQVEER
LRVLGQRSGEGATAAVVPKKVAASNPISRTARTAPNSIQRSPLQNSPTFNRGGQASGHQK
IGSGASRPVQKAGGSYDDKLVEMINTTIVDRSPAVKWDDVAGLDKAKQALMEMVILPTKR
RDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVR
TLFMVAIDRQPSVIFMDEIDSVMSTRLANENDSSRRLKSEFLIQFDGVSSNPDDLVIVIG
ATNKSQELDDAVLRRLVKRIYVPLPDPNVRKLLLKNQLKGQAFKLSNYDFERLAVETEGY
SGSDLRALCEEAAMMPIRELGPQNILTIKANQLRPLRYEDFKNAMTVIRPSLQKSKWDEL
EKWNEEFGSS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcctccgcctgctagcggactccttctcttcgctgctcttctcgtcgcggggt
gggggagcgcccatggacgcggctggggctgcgccgtcgccggcggtggtggtgggggag
cgcgtggcggtgaagctcaggggctacttcgacctcgccaaggaggagatcgacaaggcc
gtgcgcgccgaggagtgggggctccccgacgacgccaccgcgcactaccgcaacgcgatg
cgcgtcatgctcgaggccaaggccgcgcgcgtccccgacgccgtctcgtccagcgagagg
gggcaggtcagggtgtaccaggagaagatcgccaagtggcaggcgcaggtcgaggagcgg
ctcagagtgcttgggcagagaagtggtgaaggggccactgctgcagtagtgcctaagaag
gttgctgcaagcaatcctattagtaggactgcaagaacagcgccaaatagcatccaaaga
tctcctttgcaaaatagtcctaccttcaacagaggtggccaagcatctggacatcagaag
ataggaagtggagcttccagacctgttcaaaaggctggtggaagctatgatgacaagctt
gttgaaatgattaatacaacaattgtggatagaagccctgctgttaaatgggatgacgtt
gctggtcttgacaaggcaaagcaagcactcatggaaatggttattttgcctactaaacga
agggatttgttcaccggacttcggagacctgctaggggtttgcttctctttggtccacct
gggaatggaaaaacaatgcttgccaaagctgttgcatcagaatctgaagcaacatttttt
aatgtttcggcttcttcattgacatcaaagtgggtaggagaagctgaaaaacttgtcagg
acacttttcatggttgcaattgatagacaaccatctgttatttttatggacgagattgat
agtgtcatgtctacaaggttggctaatgagaatgactctagcaggcgactgaaatctgaa
ttccttatccaatttgatggggtgtcctcaaacccagatgatttagtaattgttataggg
gctactaataaatctcaagagttggatgatgctgttcttcgaagactggtaaaaagaata
tatgtgccactacctgatccaaatgtacggaagctacttctgaaaaatcagctcaaagga
caagcattcaaattgtcgaactatgatttcgaaagacttgctgtggagactgaaggatat
tctggaagtgatctgagagccttgtgcgaagaagctgcaatgatgccaataagagagctt
ggtccacagaatattcttactattaaagcaaatcagttgcgacctttgaggtatgaggat
ttcaagaacgcgatgacggtgatcaggccaagcttgcagaagagcaaatgggacgagctg
gagaaatggaacgaggaattcggttccagctga
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