Miscanthus floridulus: 136528359
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Entry
136528359 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: sister chromatid cohesion protein PDS5 homolog A-like
KO
K11267
sister chromatid cohesion protein PDS5
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mflo03036
]
136528359
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136528359
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
136528359
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
136528359
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PTM_DIR17_Tudor
HEAT_2
HEAT_GCN1_C
LBR_tudor
WHD_HrcA
Motif
Other DBs
NCBI-GeneID:
136528359
NCBI-ProteinID:
XP_066377407
LinkDB
All DBs
Position
19:complement(45638611..45659372)
Genome browser
AA seq
1685 aa
AA seq
DB search
MAAAEQLKELGEKLQAVAPAPADELAKLLEKAVECLHGIEQSPGSSVMEAIQPSLKAVTR
EELLKHEDDNVKVLLATCFCEITRITAPDAPYNDDILRDIFYLIVGTFGGLRDVNSQSFG
RRVAILETVARYRACVVMLDLECDDLITNMFQTFLGVVSDSHEENIVKSMQTIMILIIDE
SEAVQESLLCVLLSALGQKKTGAAMSARKLARSVIEHSATKLEPYIKKFLTSSWAGNDSS
SNDQIDHQGIVFDLYQCAPKVLKVIVPYITGELLADEVDNRSKSVELLGEIFSLPGAPIM
ECFKTLFTEFLKRLTDRVVEIRISVVEYLKRCLISNPSQAEAPEIIKALCDRLLDYEENV
RKGVVAALCDVATHSPDAIPVDTIKVVAERVRDKSLAVKCYTMERLADIYKLYCQRGSDI
STNSDDFEWIPGKILRCLYDKDLRPESIDTILCGSLFPPEFPMKGRVKHWVTAATYFDKV
EMKALEQILLQKQRLQQEMLKYISLRQPSQEDAPDLQKRISGCFRSISRLFSDSAKCEEN
LSTLHQLKDADIWNIFTSLLNCSTTFEKAWSLRAELLKILGEKHVLYNFVGTLTMRCSYL
LVNKEYAKEILSEASEKKTSGNTKLISSCMNLLTAISSFFPSLLSGLEEDIVELLKEDNE
VLKEGIAHVLSKAGGNIREQLASTSSLDLLLERLCLEGTRRQAKYSVHALAAITKDDGLM
SLSVLYKRLVDLLEEKKVNIPSILQSLGCIAQIAMPIFETRKEEIISFITKKILECNDDM
VQNSSNKSEWGDSTQNCLLKIYGIKTLVKSYLPCKDAHAQPGIEKLIDILKNILTYGDIS
PNMVSSAVDKAHLRLAAAKAVLRLSKQWDHKVPVDVFYLTLTISQDDFPQVRKLFLCKVL
QYIKERALDAKYACAFMFGVNDYHAPQYEEFKHNLTEVVQICQQVKMRQLSVQADMNLLM
AYPEYIISFLVHALAHDPSSPDIEEHENVKAFGPIYWRLYLILSILLGEEGLQHSVPGMK
KDSFTTIISIFKSIKSSQDVVDGNKTKTLCAICDLGTLIAKRLCQDQTSLSEAQTVPLPA
QLYSPLLDNQNENSVENYEQIWLGCEKVLAHFEAVMTANMDKVESPKHKMLIDVTDEFGN
EVPLGKIVKLLKSRGEKKAGKKQKTPSSTVNAGNDDDVLGLVREINLNNQEDLEKSPKGK
PKKHQTDTKDSNKKPLDFSSPKRKRSISKSRPHSAKGSKSSDERLLHTPNTERTTISLES
KLKEKNRDDSTDTELLVSPSTKTPVSKGNKGAKKSHIDTLNSVPKKSADADSTKRTVEPR
SLNGLLKRQKAKPISGLVKCATQDSSGEDLIGHRIKVWWPLDKRFYEGAVQSYDSSKKKH
TVLYDDGDVEVLSLAKEKWILIESNDSSVKKQKKDHLGTNQGRALERTSSSKSPPSQPKS
KKRSLPPKKKGQPKNKRRKTAGRNNSVEEGSGAAVGNDSDSSSSLAHSDVDKDVNSDSHM
EEVVVSSAEKEKAXKDSKDVKIKEKSGKDSKGMEMKEKARKDSKDVETKEKAGKDSKDAG
TKEEAGKDSKDVEMKEKVGKESKDVKMKEKAGKESKDTEVKEKPGKDSKDVKMRDKAGKE
SKYVEVKEKAGKDSKDVETKGKAGKESKDVEMKDVEKLDDHTLSNKAESDNETLSVWKKR
TAKAT
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcggagcagctcaaggagctgggggagaagctgcaggcggtggcgccggcg
cctgcggacgaactcgccaagctcctcgagaaagctgtggagtgcttacatggaatagag
cagtcgccggggtcctcagtgatggaagctattcaaccaagtctaaaggctgttaccaga
gaagaattgctgaagcatgaggatgataatgtcaaagttctcttggcaacatgtttctgt
gaaattacaagaataactgcacctgatgcgccctacaacgatgacattttaagggatata
ttctatctgatcgtgggtacatttggcggactcagagatgttaatagtcaatcctttggc
aggagagttgctattcttgaaacagttgctagataccgagcatgtgttgtgatgttagat
cttgaatgtgatgatcttatcacaaacatgtttcaaacatttttaggagttgtcagtgac
agtcatgaagaaaacattgtaaagtcaatgcagacaataatgatccttattatagatgag
agtgaagctgtacaggagagtcttctatgtgtactgttgtcagcattggggcagaaaaaa
actggtgctgcaatgtctgcgcgtaaacttgctcgcagtgtcatcgagcattctgctaca
aagcttgaaccttacataaagaagtttctaacgtcatcatgggctgggaatgacagttct
tctaatgatcaaattgatcaccagggaatcgtatttgatttatatcagtgtgctcctaag
gttcttaaggtgatcgtgccgtatattactggggagctactggcagatgaagtagataac
cggtctaagtcagttgaattacttggggaaattttttccttacctggagcccctatcatg
gaatgtttcaagactcttttcacagagtttctcaagagactgactgatagagttgttgaa
atccgtatttctgtggtcgagtatttgaagagatgtctaatatcaaatccttcccaagct
gaagctcctgaaatcatcaaggcactttgtgacagattgttggattatgaagaaaatgtg
cggaagggagtggtggctgcactttgtgatgtagctacccattctcctgatgctattcca
gttgatacaattaaagtagtagcagagcgtgtccgtgataaatcgctggctgtgaagtgc
tataccatggagaggttggcagatatttacaagctatactgccagaggggttctgatatc
tcaacaaattctgatgattttgagtggatacctggaaaaatattaagatgtctttatgac
aaagatttgaggccagagtcaatcgacactattttgtgtggttcattgttcccaccagag
tttccaatgaagggaagagtgaaacattgggttacagctgcgacatactttgataaagtt
gagatgaaagctcttgaacaaattctcctgcaaaagcaaagactgcaacaagaaatgctg
aaatacatatcgcttcggcaaccaagccaggaagatgcccctgatctgcaaaaaagaatc
tctggatgtttccggagcatctctcgcttattcagtgactccgcaaagtgtgaggagaac
ttgagcacgcttcatcagctaaaagatgccgatatctggaatatattcactagcctgctt
aattgttcaactacattcgagaaagcttggtctcttcgggcagagttgcttaagatactt
ggtgaaaaacatgtgctttataattttgttggcacattaacaatgagatgttcatattta
cttgtaaacaaggagtatgcaaaagagatcctttcagaagcttctgaaaagaagacttct
gggaatacaaaactcatctcatcatgcatgaatcttctaacggcaatatctagtttcttt
ccgtctcttttgtctggacttgaagaagacattgttgaactcctgaaagaggataatgaa
gtgcttaaagagggtattgcacatgtgttatcgaaggctggtggcaatattcgtgaacag
ctagcctcaacaagttcccttgatcttctattagagcgtttatgcttagagggtacacgg
aggcaggctaaatactctgttcatgcacttgctgccattacaaaagatgatggtcttatg
tcactatctgttctctacaagaggcttgtggatttgttggaagagaagaaagtgaatata
ccatctatcttgcaatctttgggttgtatagcccagatagcgatgccaatttttgaaaca
cggaaagaagagataataagtttcataactaaaaaaattcttgagtgcaatgatgatatg
gttcaaaattcttctaataaatctgaatggggtgatagtacacagaattgtttgctgaag
atttatggcatcaaaactttggtgaagagctatctaccttgcaaagatgctcatgcacag
ccaggaatagagaagttaattgatattctgaagaatattcttacctatggtgatatatct
ccaaatatggtctcaagtgctgttgataaggcccatttgaggcttgcagcagcaaaagct
gttcttcgcttatcaaaacaatgggaccataaagtgcctgttgatgtattttatttgact
ttgacgatttcacaggatgattttcctcaggtgagaaaattatttctttgtaaagtactt
caatatatcaaggaaagggccttggatgcaaaatatgcttgcgccttcatgtttggtgtt
aatgattatcatgccccgcagtacgaagagttcaagcacaatctgactgaagtggttcag
atatgccaacaagttaagatgcgccaactttcagtccaagcagatatgaatttgctgatg
gcttacccagaatatataatttcctttttggttcatgccctcgctcatgatccttcatcc
ccagacatcgaagaacatgaaaatgtcaaagcatttggtccaatttactggcgactatat
ctgattctttcaatcctcctgggggaagaaggtttgcaacatagtgttccaggcatgaaa
aaggacagcttcactacaataatatctatattcaaaagtatcaaatcttcacaggatgtg
gttgatggaaataagaccaagactctgtgtgctatatgtgatcttggtactcttattgca
aagaggttatgccaagaccaaacgagtttatcagaagctcaaacagttccattgcctgct
caactttactcgccgcttctggataaccaaaatgaaaattctgtggagaattatgagcag
atttggctgggatgtgagaaagtactggctcattttgaggctgtaatgactgcaaacatg
gataaggttgaatctcccaaacataagatgcttattgatgtgactgatgaatttggaaat
gaagttcctcttgggaaaattgtcaaacttcttaaatcgcgaggagaaaagaaggcgggg
aaaaagcagaagacaccatctagtacagtaaatgcagggaacgatgatgatgtcctgggt
ttagtaagagaaattaacttgaacaaccaagaagatttggagaaatcgccaaagggcaag
cctaagaagcatcagacagatacaaaagatagtaacaagaaaccactcgatttttcttca
cctaaacgcaaaagatcaatttctaagagtagaccacattcagcaaaaggtagtaaaagc
agtgatgagcgtctactacatactcctaacacagagaggaccactatctccttggaatct
aaattgaaggagaaaaacagagatgattcaactgatacggaactgttagtatcacctagc
actaaaacccctgtatctaaaggaaataagggtgcgaagaaatcccatattgatactttg
aacagtgtcccaaagaagtctgctgatgcagacagtactaagagaactgttgaaccgaga
agtttaaatgggttacttaaaaggcaaaaggcaaaaccaatttctggtttagtaaagtgc
gcaacacaggactcaagcggtgaagacttgataggacaccgaataaaagtttggtggcct
ttggataagagattttatgaaggtgccgtgcaatcatacgattcatccaagaaaaaacat
acggtgctatacgatgacggagatgttgaagtgcttagcttggctaaagagaagtggata
ctgattgaaagtaatgactcatcagtgaagaagcaaaagaaggatcatcttgggacaaac
caaggaagagcactggagagaactagcagcagcaagtctccgcctagccaaccgaagtca
aaaaagaggtccttacctccaaagaagaaagggcaaccaaagaacaaacgaagaaagact
gcaggaagaaacaattctgtcgaagagggtagtggagctgcggtaggtaatgattcagat
tcatccagttctcttgctcactcagatgttgacaaagatgtaaattctgatagccacatg
gaggaagtagtagttagctcagctgagaaagagaaggcctagaaagattctaaagatgtg
aaaataaaagagaagtcagggaaggactccaaaggcatggaaatgaaagagaaggcaagg
aaggactccaaagatgtggaaacgaaagagaaggcagggaaggactccaaagacgcggga
acgaaagaggaggcagggaaggattccaaagacgtggaaatgaaagagaaggtagggaag
gaatccaaagatgtaaaaatgaaagagaaggcagggaaagaatccaaagatacggaagtg
aaagagaagccagggaaggactcaaaagatgtaaaaatgagagataaggcagggaaagag
tccaaatacgtggaagtgaaagagaaggcagggaaggactcgaaagatgttgaaacgaaa
gggaaggcgggaaaggaatccaaagatgtggaaatgaaagatgtggaaaagctggatgac
catactttgagcaacaaggcggaatcagacaacgaaactcttagcgtgtggaaaaaacgt
acagcaaaagcaacatag
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integrated database retrieval system
