Miscanthus floridulus: 136528526
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Entry
136528526 CDS
T10264
Name
(RefSeq) mRNA-decapping enzyme subunit 2-like
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136528526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136528526
Enzymes [BR:
mflo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
136528526
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
136528526
mRNA degradation factors
5'-3' decay
Decapping complex
136528526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
Motif
Other DBs
NCBI-GeneID:
136528526
NCBI-ProteinID:
XP_066377601
LinkDB
All DBs
Position
19:complement(101804893..101808278)
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AA seq
324 aa
AA seq
DB search
MTMAGGGGLNRSSSRGQLPPQELLDDLCSRFLLNVPKEELESFERILFLLEQAHWFYEDN
SVEHNPNLKSLSFKDFTSLMFKSCTALRPYIAHLDDIYKDFNNYKFRVPVSGAIILDDTY
ERCLLVKGWKAGASWSFPRGKRNKDEEDHTCAVREVLEETGCDVSTFLNLDDYIEVSIGQ
QRVRLYIITGVKRDTVFAPQTKKEISEISWHRIDELLPASDDAVSRAVNGMKLYMVAPFL
TGLKAWIATHPPPLHQKPETSARGTVWKAKNSSSGSTPVENPVAKAGSDLQAHHVDNRPG
RSFRNFRFDTASILQSMEASFLRT
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggcgggcggcgggggactgaaccggtcttcatcgagggggcagctgccgccg
caagagctgcttgacgatctctgcagccggttccttctgaatgtgcccaaggaggagctg
gagtcgttcgagcggatcctgttcctgctggagcaggcgcactggttctacgaggacaac
tccgtcgagcacaaccccaacctcaagtccctctccttcaaggacttcacctccctcatg
ttcaagagctgcactgctctcaggccctacatcgcgcacctggatgatatctacaaggac
ttcaacaactacaagttccgtgtccctgtgtccggcgccatcatcctagatgacacttat
gagaggtgcttacttgttaagggatggaaggctggggccagctggagctttcctcgtgga
aagaggaataaagatgaggaagatcacacatgtgccgttagagaagttctagaggaaact
gggtgtgatgtttctacatttttaaatttggatgattacattgaagtttcaattggacaa
caaagggttcggctctacatcataacaggggttaaaagagatactgtgtttgcacctcaa
accaagaaggaaatcagtgaaatctcatggcacagaattgatgaactcttaccagctagt
gatgacgcagtatctcgggcagtgaatggaatgaagctgtacatggttgctccatttttg
acgggtcttaaggcttggattgccacgcatcctccaccactgcatcagaaaccagagaca
tctgctagaggtactgtgtggaaggcgaagaattcgtcaagtggcagtaccccagtggag
aaccctgttgctaaagcaggatctgacttgcaggcgcatcatgttgacaaccgccccggt
cgcagcttcagaaacttcaggtttgacacggcaagcatcctgcagtccatggaggcttcc
ttcctacgcacctag
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