Miscanthus floridulus: 136528792
Help
Entry
136528792 CDS
T10264
Name
(RefSeq) uncharacterized protein isoform X1
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
mflo Miscanthus floridulus
Pathway
mflo00260
Glycine, serine and threonine metabolism
mflo00400
Phenylalanine, tyrosine and tryptophan biosynthesis
mflo01100
Metabolic pathways
mflo01110
Biosynthesis of secondary metabolites
mflo01230
Biosynthesis of amino acids
Module
mflo_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
136528792
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
136528792
Enzymes [BR:
mflo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
136528792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
136528792
NCBI-ProteinID:
XP_066377872
LinkDB
All DBs
Position
19:complement(88949471..88954650)
Genome browser
AA seq
503 aa
AA seq
DB search
MAAAAAATAAASTSTLRPALSQAAGPEQSASLLCTPKHRVAASASRRSLRFTARASSNPG
AKVSIPKQWYNLIADLPVKPPPPLHPQTHQPLNPSDLSPLFPDELIRQEVTDERFVDIPE
EVIDVYKLWRPTPLIRARRLEKLLSTPAKIYYKYEGTSPAGSHKPNTAVPQAWYNAAAGV
KNVVTETGAGQWGSALSFASSLFGLNCEVWQVRASFDQKPYRRLMMETWGAKVHPSPSTA
TEAGKKILEADPSSPGSLGIAISEAVEVAATNADTKYCLGSVLNHVLLHQTVIGEECLEQ
LAALGETPDVVIGCTGGGSNFGGLAFPFLREKLRGNMSPTFRAVEPAACPTLTKGVYAYD
FGDTAGLTPLMKMHTLGHGFVPDPIHAGGLRYHGMAPLISHVYELGFMDAIAIQQTECFQ
AALQFARTEGIIPAPEPTHAIAAAIREALECKRTGEEKVILMAMCGHGHFDLAAYEKYLR
GDMVDLSHPAEKLEASLAAVPKV
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgccgccgccaccgccgcagcctcaacctccacccttcgtcctgctctc
tcccaagcagcagggccagagcagagcgcttcactgctgtgcacaccgaaacaccgagtt
gctgccagtgccagcaggagaagcttgagattcaccgctagggccagttcgaatccgggc
gccaaggtgagcatcccgaagcaatggtacaacctcatcgccgacctgccggtgaagccg
ccgccaccgctgcacccgcagacgcaccagcctctgaatcccagcgacctctcccctctg
ttccccgacgagctgatcaggcaggaggtcaccgacgagcgcttcgtcgacatacccgag
gaggtcatcgacgtgtacaagctctggcgcccgacgcccctgatcagggccaggaggctg
gagaagctgctcagcacgccggcgaagatctactacaagtacgaggggaccagcccggcg
gggtcgcacaagcccaacaccgccgtgccgcaggcgtggtacaacgccgcggcaggggtg
aagaacgtggtcaccgagaccggcgccggccagtggggcagcgcgctgtccttcgccagc
agcctcttcggcctcaactgcgaggtgtggcaagtgcgcgcgtcgttcgaccagaagccg
taccggaggctgatgatggagacgtggggcgccaaggttcacccgtcgccgtcgacggcg
acggaggccggcaagaagatcctggaggcggacccgtccagccccggcagcctcgggatc
gctatctccgaggcggtggaggtggcggccaccaacgccgacaccaagtactgcctgggc
agcgtgctcaaccacgtcctcctccaccagaccgtcatcggggaggagtgcctggagcag
ctggcggcgctcggcgagacgcccgacgtcgtcatcggctgcaccggcggcgggtccaac
ttcggcgggctcgcgttcccgttcttgcgcgagaagctgcgcggcaacatgagccccacg
ttcagggccgtggagcccgcggcgtgccccacgctcaccaagggcgtctacgcctacgac
ttcggcgacacggccgggctcacgccgctgatgaagatgcacaccctcggccacggcttc
gtccccgacccgatccatgcaggtgggcttcgctaccatggaatggcacctctgatctca
cacgtgtacgagctgggcttcatggacgccatcgcgatacagcagactgaatgctttcaa
gctgccttgcaattcgccaggacggagggaatcatcccggcgccggaaccgacgcacgcg
atcgcggcggcgatcagggaggcgctggagtgcaagcggaccggagaggagaaggtcatc
ctcatggccatgtgcggccacggtcacttcgacctcgccgcgtacgagaagtacctgagg
ggcgacatggtcgatctctcgcacccggcggagaagctagaggcctccctcgctgccgtg
cccaaagtctga
DBGET
integrated database retrieval system
