Miscanthus floridulus: 136528803
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Entry
136528803 CDS
T10264
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
mflo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
136528803
04120 Ubiquitin mediated proteolysis
136528803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136528803
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136528803
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
U-box type E3
136528803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
136528803
NCBI-ProteinID:
XP_066377887
LinkDB
All DBs
Position
2:complement(121406409..121414738)
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AA seq
1029 aa
AA seq
DB search
MASPSPASARPQRSPDEVEDIILRKILLVSLTPPANPSPAVAYLELTAAELLSESRPLLA
LRDAAERLLIDRLSLPDPPAGSPTPFAFLVSAFRRAADEARKISAKRDAALRGRLAASIA
HLQALILSYSRIVAGNPDTFPTPPGAQHPAADLLVFLLAEAADPLDPTPAPGAPPPSGFI
DEFLGGADYDSIEPAMGELYELLRQSVDKVSALGDFQRPLRVLRRLVDIPNCAKALVNHP
KWIPKNQILVIGEGRVMELDSVLGAFFHVSAIRDREFASKPDVGQQCFSEASSRRPADLL
SSFTTIKTVMNGLYDGLKDVLLILLKNLDTREKVLEYIAEVINKNASRSGMQVDPLKCAS
SGMFVNLSAVMLRLCEPFLDNMESKKDKIDVKYLFCNNRIDFKDLTAINASSEEVSSWIE
SINNEHAQNNASGEARFVESQEATSSGKNSTASQLRCSKKENFSFICECFFMTSRVLNLG
LMKAISDYKHISQQLARFEDDLESNRAVRDQGGGSLQLEQDISRLEKIVEILSQDKFCYE
AQILRDGAFLQRALSFYRLVILWSVNLVGGFKMPLPSQCPKEFACIPEHFLDDAMDLLVL
TSRIPKALESFVLDDFVSFIIMFMGSTSYIKNPYLRAKMVEVLNCWMPQRSGLNSTASFE
GHQLCLDYLVRNLLKLYVDIEFTGSHTQFFDKFNIRHNIAELLEYLWDVPSHRNAWRQIA
KEEEKGVYLNFLNFLINDSIYLLDESLNKILELKEIEAEMANTVEWERRPAQEREERLRV
FHQWENIVRFDMRLANEDVGMLAFTSEQIPAPFLLPEMVERVASMLNYFLLQLAGPQRKS
LTVKDPEKYEFKPKQLLKQIATIYVHISRGDKESVFPAAISKDGRAYNDQLFASAANILW
KIGGDPKIIQEFMQLAGRAKAAASEAMDAEAILGDIPDEFLDPIQCTLMKDPVTLPSSKV
TVDRPVIIRHLLSDSTDPFNRSHLTQDMLIPNTELKLQIEEFVRSQQSRKRSAAVLEIGE
ADGADDMAE
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccccatcgccggcttccgcgcgtccgcagcgctcgcctgacgaggtggaggac
atcatcctccgcaagatcctcctcgtctccctcacaccgccggccaaccccagccccgcc
gtcgcctacctcgagctcaccgccgccgagctcctctccgagtcgcgccctctcctcgcc
ctgcgcgacgccgccgagcgcctcctcatcgaccgcctctcgctcccggacccgcccgcc
gggtccccgacccccttcgccttcctcgtctccgccttccgccgcgccgccgacgaggcg
cgtaagatctccgccaagcgcgacgccgctctccgggggcgcctcgcggcctccatcgcg
cacctccaggccctcatcctctcctactcgcgaatcgtcgccgggaaccccgacaccttc
cccaccccgcccggcgcgcaacaccccgccgccgacctcctcgtattcctcctcgctgag
gcagccgacccgctcgaccccaccccggcccccggggcgccaccgccgtcgggcttcatt
gatgagttcttgggcggcgcggactatgactccatcgagccggccatgggggagctgtac
gagctccttaggcagagcgtcgataaagtttcggccctgggtgacttccagcgcccacta
cgggtgctcaggcggcttgtggatatccccaattgcgccaaggccctggtgaaccatccc
aagtggataccgaagaatcagatcttggtcattggggaagggagggtcatggagctcgac
agtgtacttggggccttcttccatgttagtgctatccgagaccgtgagtttgccagcaag
cctgatgtggggcaacaatgtttctcagaggcatcttcacgtcggccagctgacttgttg
tcatctttcacaacaatcaagactgttatgaatggtttgtatgatggccttaaggatgtc
cttctaatcctcctaaaaaatttggatactcgagaaaaggttcttgagtatatagcagaa
gtgataaataaaaatgcatccagatctggcatgcaggtagacccattaaaatgcgcgagt
tcaggtatgtttgtgaatcttagcgctgtgatgctccgtctatgcgagccttttctggac
aacatggaatcaaagaaggataagattgatgtcaagtacctcttctgtaacaatagaatc
gatttcaaggatttgacagctataaatgcgtcttcagaagaagtctcgtcttggatagag
agtataaacaatgagcatgctcaaaataatgccagtggagaggctcgatttgtggaatca
caggaagccacaagctctggcaaaaatagcacagcctcacaacttaggtgctcaaagaag
gagaatttctcatttatttgtgaatgtttcttcatgacctcaagggtacttaatctcggg
ttgatgaaagctatatcagactacaaacacatttctcagcaacttgcaaggtttgaagat
gatttggaatcaaacagagcagtgagagatcaaggagggggttcactgcagcttgagcaa
gatataagtcgcttggagaagattgtcgagattttatcacaggataaattctgttatgaa
gctcagatactacgagatggtgcattccttcaacgagcattatctttctacagattagtg
atactgtggtcagttaacctagttggcggatttaagatgcctttgccatcacaatgcccc
aaggagtttgcttgcattccagaacattttcttgacgatgcaatggatttacttgttcta
acctctagaattccaaaggctttggaaagctttgtattggatgactttgtcagcttcatc
attatgttcatgggaagcacatcttacattaagaatccttacctaagagcaaagatggtt
gaagttttgaattgttggatgccgcaaagaagtggcttgaattctacagcctcgtttgag
gggcaccaactgtgtcttgactatcttgttagaaatcttctaaagctttatgtggatatt
gaattcactggctcccatacacaattttttgacaagtttaacattcgacataatattgct
gagcttctggagtatttatgggatgtccccagtcaccgaaatgcatggagacaaatagct
aaagaggaggagaagggtgtatacttaaattttcttaactttctcatcaatgatagcatc
tatcttcttgatgagagtttgaacaaaattcttgaactgaaagaaatagaggctgaaatg
gctaacactgttgagtgggagcgcagacctgctcaagaaagagaggagcggctgcgtgta
tttcatcagtgggaaaatattgttcgatttgacatgaggctagccaatgaggatgttggg
atgcttgcattcacctcggaacaaattccagcacctttccttctccctgaaatggtggaa
agggtcgcgagcatgcttaattacttcctcttgcaacttgctggtccccagaggaaatct
ttgactgtaaaggatccggagaagtacgagttcaagccgaagcagctattgaaacagatt
gccaccatctatgtccatatctcaaggggcgacaaggaatctgtcttcccagctgcaatc
tccaaagatggaagagcatacaatgatcagttgtttgctagtgcagccaatattttgtgg
aagattgggggtgatcccaaaatcatacaggagtttatgcaacttgctggtagggcaaaa
gctgctgcttctgaagctatggatgctgaggcaatccttggggacataccagatgaattc
ctcgatccaattcagtgtactctaatgaaagatcctgtgacactaccatcatcgaaggtc
acagtagatcggcccgtaattatcaggcatctgctgagtgattctacagatccatttaac
cgctcccacctcactcaagacatgctgataccaaacacggaactcaagttgcagatcgag
gaatttgtccggtcccagcagtcgaggaagcgatctgctgcggtgttagagattggcgaa
gcggatggtgctgatgatatggccgaatga
DBGET
integrated database retrieval system
