Miscanthus floridulus: 136529589
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Entry
136529589 CDS
T10264
Name
(RefSeq) transcription initiation factor TFIID subunit 1-like
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
136529589
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mflo01001
]
136529589
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mflo03021
]
136529589
03036 Chromosome and associated proteins [BR:
mflo03036
]
136529589
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
136529589
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
136529589
Protein kinases [BR:
mflo01001
]
Serine/threonine kinases: Other
TAF1 family
136529589
Transcription machinery [BR:
mflo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
136529589
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
136529589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
ubiquitin
zf-CCHC_6
Motif
Other DBs
NCBI-GeneID:
136529589
NCBI-ProteinID:
XP_066378761
LinkDB
All DBs
Position
19:complement(90569281..90585498)
Genome browser
AA seq
1804 aa
AA seq
DB search
MSDGELHEEENPTNSAADDDDEDYEEPGGGNHFLGFMFGNVDDSGDLDADYLDEDAKEHL
FALADKLGPSLKDIDLIKSSPAPTDPSEQDYDEKAEDAVDYEDIDEEYDGPEVEATTEED
NVLSKKDYFSSSTVYASVNSTVSVFDDENYDEEEEPPNDNEPPGDSAAQNLSSVSIEQAA
MATSSDNLAMEKIGLLSHPEEGMDFEYEDLENEKGTGEGHLEPESATSLPVLCIEDGNAI
LRFSEIFGIQEPVRKVKTDHHKRPVNKELQITNVSDNVEEDEELILRSTIQNFSTLKHIQ
MNADFVESDSDESISDVTLRLKDSCLSEQPMKDAHKDIRTVQRSPICPDFYPLEHDDWEN
DIIWNNSPATDQQPYAKICESEESVDTHGEDQGKDYGQVSRCWDVQSKSNGSPVIEETFG
CTEMPAPANYCSPGKSYPPLTNEDNLDHITPNNLDDTVKIDTTMRLNNLSLLNRELLEGS
WLDNIIWDPTEVTPKPKLIFDLKDDHMLFEILDEKNVDHLRSHARAMIVSQSTKTSTPTV
DNFDNQAKTLSGRFNISNDKFYSNRKTPQQAKSHTKKRALMGIKVVHSAPAHKLQTMKPV
LSNKEIANFHRPRAKWYPHENKIAAQLQGTACSHGRMAVLLMSLGGKGVKILVNAEDTPV
SVKLKASKKFELKPSEKINLFCSGKELQDDISLAMQNVRPNSIVHVVRTEVYLWPKAQKL
PGEDKPLRPPGAFRKKTDLSIKDGHVFLMEYCEERPLLLSNAGMGARLCTYYQKTSPTDQ
TAASLRNNSDGLGTVLAIDPSDKSPFLGDIHSGSHQSCLETNMYRSPVFPHKVAPTDYLL
VRSAKGALSLRRIDKLYAVGQQEPHMEVFSPGTKNVQNYLLNRVLAYVYREFRARERPDG
IPQIRADELPIQSPLTEAIVKKRLKHCADLKKGPKGHFFWTQRPDFRVPSEEELRRLLTP
ESVCCYESMQAGLYRLKRLGILKLTQPVGLASAMNQLPDEAIELAAASHIERELQITSWN
LTSNFVACTNQDRENIERLEITGVGDPSGRGLGFSYVRVAPKAPASNSVLKKKSAAAKGT
TVTGTDADLRRLSMDAARELLLKFGLPEEQIDKLTRWHRIAMVRKLSSEQAASGITIDEI
PVSKFARGQRMSFLQLQQQTREKCQEIWDRQVQSLSAIDGDDNGSDTEANSDLDSFAGDL
ENLLDAEEFDDEDTSTADLRIDKADGMRGLKMRRCSLHAQINEEIEDDETEASLAKKLLE
DNGNDVKRKKQPVELANCGTSIGANKMKQSKTGQMIKSSGYAGALTPKESTPREGKEVEN
SFAEGGLPSKLKPKMALDVNEILLVKKKSVLGKDGPEEKKQGARGDTLVCGACGQVGHMR
TNKLCPKYGEDPEISEMDANSVKSNPTDTNHLQAKIPKRLITKVSSEVTETEGPEGIEKT
KSVPVKFKVGAPDKSLERNMSLSVSLISDKRVMDVTDSRSTGKVNKIVIPNKMKSDDFPP
DTPKPSVVFRPPAEEKNAPLKKITIKQPKGIDQQRHVEPRSGQEPTRKTRKIVELSSFED
KSREDDHWFGGEPSQMNSSHERRLGLEGKRSKAIMQNDRSWRDFEEQREMPQPRLFDATI
YASRDEDHLKAKKKIKKKKKHEFKDDDLLDHRPYRNDRRVPERHRAVKRSSPAHVIGYAS
SAKRRRGGEVELSNILEKIVDHLRGLSGSLLFLKPVTKKDAPDYLDFIQHPMDLGTIRDK
VRKMVYRNQDEFRHDVAQIQLNAHLYNDNRHPHIPPLADELMEVCDYLLDQSADLLTEAE
DAIE
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacggtgagctccatgaagaggagaacccgaccaacagtgccgcagatgacgat
gacgaggattatgaggagcctggtggaggaaatcacttcttggggtttatgttcggcaat
gtagatgattctggtgacttagatgctgactatcttgatgaggatgcgaaggaacacctt
tttgcactggcagataagcttggtccatctctcaaagacattgacctaatcaagtcttct
ccagcaccaactgatccttctgaacaagactatgatgagaaggcagaagatgctgttgat
tatgaagatattgatgaagaatatgatggacctgaagttgaagcaactacagaggaagac
aatgtgttgtcaaaaaaggattacttctcttcatctacagtgtatgcatcggtgaatagt
acagtttcagtgtttgacgatgagaattacgatgaggaagaagaaccacccaatgataat
gaacctcctggtgatagtgctgcccaaaatttatcttcagtttctatcgagcaggcagct
atggcaacctcaagcgataaccttgccatggaaaagattggtttgttatcacatccagaa
gaaggcatggactttgaatatgaagatttggagaatgaaaagggcactggggaaggtcat
cttgagcctgaaagtgcgacttccctccctgttttatgcatagaggatgggaacgcgatc
ctgaggttctctgaaatttttggtatccaagagcctgtaagaaaagtgaaaacagatcac
cacaaacgtccagtgaataaagagcttcagatcacaaatgtttctgacaatgttgaagaa
gatgaggaactaattctccggagcactatccaaaatttctcaactttgaagcacatccag
atgaatgcagattttgttgagagtgacagtgatgagtctatttctgatgtcactttaagg
ctaaaggattcatgtctttcagaacaaccaatgaaagatgcgcataaggatattcgtact
gtccagcgatctccaatttgtcctgatttttatccacttgagcatgatgattgggaaaat
gatatcatttggaacaattcaccagcaactgatcagcagccttatgcaaaaatctgtgaa
tctgaagagagtgtggacactcatggtgaagaccagggtaaagattatggccaggtctcc
aggtgttgggatgtacagagtaaaagcaatggttccccagtaattgaagagacttttggt
tgtacagaaatgcctgctccagctaactactgttcccctgggaaaagttaccctccactg
acaaatgaagataacttagatcacataacgccaaataacttagatgatacagttaaaatt
gacaccacgatgcgtttaaataaccttagtttactgaacagggaattattagaaggatca
tggttggacaacataatttgggatcctactgaggttaccccaaagcctaaactgatcttt
gacctcaaagatgatcatatgctttttgagatcctagatgaaaagaatgtggatcacctc
cggtctcatgctcgtgctatgattgttagtcagtcaaccaagacttcaacaccaacagtt
gataattttgacaatcaagcaaagacattgagtggcagattcaacatctccaatgacaag
ttttattcaaataggaagactccacagcaagctaaatctcacactaaaaaacgtgcttta
atgggcataaaggtggtgcattctgctccagctcataagctgcaaaccatgaagccagta
ttgagcaataaggaaattgcaaactttcatagaccaagagctaagtggtacccacatgaa
aataaaattgccgctcagttacaaggaactgcttgtagccatgggaggatggctgtttta
cttatgtcattgggaggaaaaggagtcaagattttggtaaatgctgaggacactccggtc
tctgtcaaattaaaagcatcaaagaagttcgaattgaagccttccgagaagatcaatttg
ttctgttctgggaaagagcttcaggatgacatctcgttagcaatgcaaaatgtgcgacca
aactccattgtgcatgttgttcgcactgaagtgtatctatggccaaaagcacagaaatta
cctggtgaggacaagcctctacgccctcctggggctttcaggaaaaaaactgacttgtct
atcaaggatggacatgtttttttaatggaatattgtgaagagagacctttgcttctctcg
aatgcaggaatgggagcccgtctctgtacatattaccagaaaacttcccctactgatcag
acagctgcatcactgcgaaacaacagtgatggactgggcacagtgcttgcaattgatcct
tctgacaaatccccttttctaggagatatacattctgggtcccaccaatcttgtcttgaa
acaaacatgtacagatcacctgtatttcctcataaggttgcaccaactgattacttatta
gttcgttcagccaaaggggcgctttccctccgtcgcattgacaagctatatgctgttggc
caacaagaacctcatatggaagtcttttcaccagggactaagaacgtgcagaattatctt
ctgaaccgagttcttgcatatgtttatcgtgagtttcgtgctagagagaggcctgatggt
attcctcagattcgagctgacgagttacccatacaaagtcctctgacagaagctatagtg
aaaaaacgattgaagcattgtgcagatttgaagaaaggaccaaagggtcattttttctgg
acacagagacctgatttccgggttccatcagaggaagaactgaggagattattgacgcca
gaaagtgtttgctgttatgagagtatgcaagctggtctttatcgtctcaagcgcttagga
attctgaagcttactcagcctgttggactggcttctgccatgaatcagcttcctgatgag
gctattgaacttgctgctgcatcacatatcgagagggaactgcaaatcactagctggaat
cttacaagtaattttgttgcttgtactaatcaggacagagaaaatatagaaagattagaa
atcactggtgttggagatccatctggtcgtgggttaggattcagctatgtgcgagtagca
ccaaaagcacctgcctccaattcagtgctcaagaagaagtcagctgctgcaaagggtacc
actgtaactgggactgatgctgatctccgcaggttgagcatggatgcagcccgtgagttg
ctgctgaaattcggcttacctgaagagcaaattgataaattaacaaggtggcatcggatt
gctatggtgaggaagctttcaagtgaacaagctgcatcgggaattactattgacgaaatt
cctgttagtaagtttgcacgtggacaaaggatgtcttttctgcaacttcagcagcaaact
agggagaaatgtcaggaaatttgggacagacaagttcagtcactttcagctatagatggt
gatgacaatggcagtgacacagaagctaacagtgatctagactcatttgctggggatctt
gagaacttgctagacgcagaagaatttgatgatgaggatactagtacagcagacttgaga
attgacaaagcagatggaatgagaggacttaaaatgagaaggtgctctttgcatgcccaa
attaacgaggaaattgaagatgatgaaacagaagcctctctggcaaagaaactacttgaa
gacaatggtaatgatgtcaagaggaaaaagcagcctgtggaattggcaaattgtggcacc
tctataggtgccaataaaatgaagcagagtaagactgggcaaatgatcaaatcatctggt
tatgctggtgcattaaccccaaaggagagcacaccaagagaaggaaaagaggttgaaaat
tcatttgctgagggtggtttgccctcaaaactaaaaccaaagatggcactcgatgtaaat
gagatccttctagttaaaaagaaaagtgttctaggaaaggatggacctgaagaaaagaaa
cagggtgcaaggggggatactcttgtttgtggagcctgtggtcaggttgggcatatgcgg
actaacaaactgtgccccaagtatggggaggatccagaaatttcagaaatggatgctaat
tcagttaagtccaaccctacggatacaaaccatttgcaagcaaagatacctaaaagattg
ataacaaaagtttcctctgaagttactgaaactgaagggccagaaggtattgaaaagaca
aaatctgtcccagtaaaattcaaagtaggggcacctgataaatccttggagaggaacatg
tcactctccgtttcactcatttctgataaacgtgtcatggatgttacagacagtagatct
actggaaaggtaaataagatagtgatacctaataagatgaagtctgatgatttccctcct
gacactccaaagccatctgttgtatttcggcctcctgctgaagaaaagaatgcacctctc
aaaaagatcaccatcaagcagcctaaaggcatagaccagcaaagacatgttgaacctagg
agtggtcaggagcccaccagaaagacaagaaaaattgtagaattatcgagttttgaggat
aaaagtagagaggatgatcattggtttggtggggaacccagccagatgaattcctcacat
gagaggaggctgggtctggaaggaaaaagaagcaaagccataatgcaaaatgacagatcc
tggagagattttgaggagcaaagagaaatgccacagccaaggctctttgatgctacgata
tatgcatcgagggatgaagaccatctaaaggcaaaaaagaaaataaagaaaaagaaaaaa
catgaattcaaagatgatgacttacttgatcacaggccgtacagaaatgacagaagggta
cctgaaagacatcgagcagtaaaaagatctagtccggctcatgtgattggatatgcgtca
tctgctaagcgtcgcagaggaggagaggttgagctctccaacatattggaaaagatagtt
gatcacttgcggggtttgagtggatcactgctatttttaaaaccagtgacaaagaaagat
gctcctgattaccttgacttcatacagcacccaatggatcttggtaccattagagacaag
gtgagaaagatggtgtacagaaaccaggatgaattcaggcacgatgtagcacagatacaa
ctgaacgcacacttatacaatgacaatcgccatcctcacatccctccactcgctgacgag
ctcatggaggtctgcgactatctgcttgaccaaagtgcagatctgctcaccgaggcggaa
gatgctattgaatag
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integrated database retrieval system
