Miscanthus floridulus: 136529844
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Entry
136529844 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
mflo Miscanthus floridulus
Pathway
mflo03013
Nucleocytoplasmic transport
mflo03015
mRNA surveillance pathway
mflo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136529844
09122 Translation
03013 Nucleocytoplasmic transport
136529844
03015 mRNA surveillance pathway
136529844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136529844
03041 Spliceosome [BR:
mflo03041
]
136529844
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
136529844
Spliceosome [BR:
mflo03041
]
Complex C
Other components
EJC/TREX
136529844
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_ACIN1
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
136529844
NCBI-ProteinID:
XP_066378997
LinkDB
All DBs
Position
2:complement(129480371..129485445)
Genome browser
AA seq
732 aa
AA seq
DB search
MSSYPVINNRPIDQWRVTDLKDELRKRKLPVKGLKEELVRRLFDSIQSEREAEEADEDVG
VNVDDQLPDANASEENTVTFTEVHQETAVHVTKQVEVPTTKVGQESAISPTRGAPSVDVE
EASTAKGEVPESFAGVNLTFEEVQVHTESTNEPVHEKTTDIDTNEAVIFNDAIDVNSDLT
PAEVKFGATEASKIEEQDFPPAPVDALTSDAAGPMDTDVVTAATSDAGPMDTDVVTAAPV
SDDGEKLAPKDDLGNKVSMYDEEHNNSDTMNEDRKPIESKPNNQIPEVSPDLGSQIKCES
ISSDNLSTNKKNNIEDNLNANNFDLELEIQPKMVEPSSGITSLGGDLQPLDDDKELVKNQ
TSLEDLDSTANVDSYKKDSPEGDSLEKLNLDRSSGDESMEEDVAEIKQVESNMKSYDLGG
KNELNSEDVKEVILPDSVVEPSKEVIAEEKSAASAEKRKLEAEEGVANTEPIKRQRRWTA
DVAKVPERQTLSQTGPETPKDIFQPAFKRSFGRSDSTASVDSPKERIVPPSEKPATTSLR
IDRFVRPFTLKAVQELLGKTGTVQDFWMDHIKTHCYVTFSSVDEAVATRDTVYNLQWPPN
NGNKLVAEFVDPQEVKLKVDPPPPPAAPISPAAATRAPPVQQTQANQSVPRQAATPKEQL
PPPPPLSKPPIADPAALAKERLPPTPKEPEPPVVTLDDLFKKTQSSPRIYYLPLSEEEVA
AKLAAQGKGKKE
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgtatcctgtgataaacaaccgaccaatcgatcagtggagagttactgatctg
aaggatgagctccgtaaaaggaagcttcctgttaaaggcttgaaagaggaactcgttagg
cgactctttgactccattcagagtgaaagagaagctgaagaagctgatgaggatgtggga
gtgaatgtggatgatcagttacctgatgccaatgctagtgaggaaaatacagttaccttt
acagaagttcatcaggaaactgcggttcatgtcactaagcaagttgaagttcctacaacc
aaagttggtcaggaatccgctatttctcccactagaggggcccccagtgttgatgttgaa
gaggcctcaacagccaaaggagaagtacctgaatcatttgctggagtaaatttgacattt
gaagaagtgcaagtgcatactgaaagtactaatgagcctgttcatgagaagaccacagac
attgacaccaatgaggcagtcattttcaatgatgcaatcgatgtgaattcagacttgacc
cctgctgaagtcaagtttggtgctacggaagcaagcaaaattgaagaacaggattttccc
ccagcacctgtagatgccttaacttcagatgctgctggtcctatggatactgatgttgtc
acagctgcaacttctgatgctggtcctatggatactgatgttgtcacagctgcaccagtg
agcgacgatggggagaaactggcacctaaggatgatttgggtaacaaggtgtcaatgtat
gatgaagagcacaataattctgataccatgaacgaggaccgcaagcccatcgaatcaaaa
ccaaataatcagatacctgaggttagtccagatttagggtctcaaattaagtgtgagtcg
atttctagtgataatctatcaactaacaaaaagaataatatagaagataatttaaatgct
aataactttgatttagaactagagattcagccgaagatggtcgaaccatcatccggcatt
acttcattaggtggagatttgcagccactggatgatgacaaagagctggttaagaaccag
acatctttggaggacttagattccacagctaatgtggactcatacaagaaagatagtcct
gaaggtgattctctagagaaattaaatctagacaggagttcaggtgatgagtcaatggag
gaggatgttgcggaaattaaacaagttgagtccaatatgaaatcttatgatctcggagga
aagaatgaacttaactcagaagatgtgaaagaggtgatcctccctgattctgttgttgag
ccttccaaggaggttatagctgaagaaaagtcagcagcttcagcagaaaagaggaaactt
gaagctgaagaaggtgttgcaaacactgaaccaatcaagcgacaacgtcggtggactgca
gacgtcgccaaagttccagagagacaaacattgagtcaaactggtcctgaaactcctaag
gatatttttcagcctgctttcaaacgatcttttgggaggtctgattcaacagccagtgta
gattctcctaaggagcggattgtaccaccttctgagaaacctgccacaacttctttgaga
attgaccgatttgtacgcccatttaccctgaaagctgtgcaggagcttcttggtaaaact
ggaactgtacaagacttctggatggaccatatcaagactcattgctatgttacattttct
tcggtggatgaagctgtggctactagggatactgtttacaacctacagtggcccccaaac
aatggcaataagttggttgctgaatttgttgatcctcaggaagtgaagctcaaggttgac
ccccctcccccgccagctgctcctattagcccagctgctgccacaagggcacctcctgtt
caacagacgcaggctaatcaaagtgtgccgcgccaggctgctacaccaaaagagcaactg
ccacctccacctcccctttctaagccccctatcgctgaccctgcagcattagcgaaagag
aggcttccgcccactccaaaggagccagagcctcctgttgtgacacttgatgatctcttc
aagaagacacagtcctctccgaggatctattatctgcctttatcagaagaggaggtggct
gccaagctcgctgcacagggcaaaggaaaaaaggaatag
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