KEGG   Miscanthus floridulus: 136529974
Entry
136529974         CDS       T10264                                 
Name
(RefSeq) coatomer subunit beta'-1-like isoform X1
  KO
K17302  coatomer subunit beta'
Organism
mflo  Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mflo04131]
    136529974
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mflo04147]
    136529974
Membrane trafficking [BR:mflo04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    136529974
Exosome [BR:mflo04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   136529974
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR75_1st EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_DCAF4 ANAPC4_WD40 Beta-prop_IFT140_1st NBCH_WD40 PEP5_VPS11_N Beta-prop_HPS5 WDR90_beta-prop_4th Clathrin Beta-prop_WDR75_2nd TPR_GEMI5 Beta-prop_IFT122_1st Beta-prop_DCAF12 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_WDR35_TULP_N HEAT_GCN1 TPR_1 TPR_8
Other DBs
NCBI-GeneID: 136529974
NCBI-ProteinID: XP_066379125
LinkDB
Position
19:2709844..2718620
AA seq 904 aa
MPLRLEIKRKFAQRSERVKSVDLHPTEPWILSSLYSGSVCIWDYQAQAMVKSFEVSELPV
RSAKFISRKQWVVAGADDMFIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWDKGWMCTQIFEGHSHYVMQVTFNPKDINTFASASLDRTTKIWSLGSPDPNFT
LDGHQKGVNCVDYFTGGDRPYLITGSDDSTAKVWDYQTKSCVQTLEGHTHNISAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAVGYMKGSRRMVIGYDEGTIMIKMG
REVPIASMDTSGKIIWAKHNEIQTVNIKTVGAGFEATDGERLPLAVKELGSCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGTALEFVWSSEGEYAIRESTSRIKTYSKSFQ
EKKTTRPSFSAERIFGGVLLAMCSSDFICFYDWADCRLIRRIDVNVKNVYWADSGDLVAI
ASDTSFYILKYNRDIVASYLEGGKPVDEEGVEDAFELLHEVNERVRTGIWVGDCFIYNSS
SRLNYCVGGEVTTMYHLDRPMYLLGYLANQSRVYLIDKEFNVIGYTLLLSLIEYKTLVMR
GDLEHANEILSSIPKAQYNSVAHFLESRGMLEEALEIATDADYKFDLAVQLGKLEVAKAI
AIEAQSQSKWKQLGELAMSTGKLELAEECLLQAKDLSGLLLLYSSLGDAEGIEKLASLAT
EHGKNNVAFLCLFMLGKVEDCIQLLVDSNRIPEAALMARSYLPSKVPEIVAIWRNDLSKI
NPKAAESLADPSEYPNLFEDWQVALTVEKNIASQRGHYPPADQYLNHAEKSDMTLVEAFK
RMQVMEHEELEDAAEENGEPDQLALEENEMQNTDDADEPEETVFVNGDEGEEQQGTDNEG
ASSA
NT seq 2715 nt   +upstreamnt  +downstreamnt
atgccgctcaggttggagatcaagcggaagttcgctcaacggtcggagagggtcaagtcg
gtggatttgcatcccacggagccatggatcctgtcgagcctgtactcggggagtgtctgc
atctgggattatcaggcacaggcaatggtgaaatcatttgaagtttcagaactgccagtg
aggtcggcaaaatttatttcaaggaaacaatgggttgtagctggtgcagacgacatgttc
attcgtgtctacaactacaataccatggacaaagttaaagtttttgaggctcatagtgat
tacatcagatgtgttgcggtccatccaactctaccatatgtgctgtcatcatctgatgac
atgctaataaaactgtgggactgggataaagggtggatgtgcactcaaatatttgaggga
cattcacactatgtgatgcaggttactttcaatccaaaggatattaacacctttgcaagc
gcatctcttgaccgcactacaaagatatggagtttgggctctccagatccaaacttcaca
ctcgatggacatcaaaagggtgtcaactgtgttgactacttcactggtggtgacaggccc
tatttgattactggttctgatgactccactgcaaaggtctgggattaccagacgaagagc
tgtgttcagacacttgaagggcatacacataatatttctgctgtttgtttccatcctgag
ctccctataatcattactggatccgaagatggtacagttcgtatatggcattcgacaact
tacagacttgagaacacactaaactatggccttgagagagtctgggctgttggatacatg
aagggatcaagaaggatggtgattggttatgatgaggggaccattatgataaaaatgggc
cgtgaagtacccatagcaagtatggataccagtgggaaaatcatttgggcgaaacataat
gaaatacaaactgtaaatatcaagacagtcggtgcaggctttgaggccacagatggagaa
agattacccttggctgtaaaagagttaggaagctgtgatttgtacccacagagcttgaag
cataaccctaacggacggttcgttgttgtatgtggagatggcgagtacataatttatact
gccctggcctggaggaatagatcatttggaactgcactggaatttgtttggtcatcagaa
ggagaatatgcaattagggaaagtacatcaagaataaagacttacagtaaatcatttcag
gagaagaaaactacccgcccttcattttcagcagagcgtatttttggtggggtattgttg
gctatgtgttctagtgacttcatctgcttttatgactgggctgattgtagactaatacgc
cgaattgatgtgaatgttaagaacgtttactgggctgatagtggtgacctagttgcaata
gcaagtgatacatcattctacatcctcaagtacaatagagatattgttgcttcttatcta
gaaggtggaaagcctgtggacgaagaaggtgtcgaagatgcttttgagctgcttcatgag
gtcaatgagcgagtgagaactggaatttgggttggagactgctttatctataactcatcg
tcgcgcctaaattattgcgttggtggtgaggtcactactatgtatcatttggatcgccct
atgtacctattgggatatcttgcgaaccaaagtcgagtttatcttattgacaaggagttt
aatgtcattgggtacacattacttctgagtttgattgagtacaagacccttgtgatgcgt
ggggatttggaacatgcaaatgaaattttatcgtccataccaaaggcgcaatataatagt
gttgctcattttttggaatcgagaggtatgttggaagaggctcttgagatagccaccgat
gctgactacaagtttgacctagctgtgcagcttggaaaattagaagttgcaaaggctatc
gccatagaagcacaaagtcaatctaaatggaagcagttgggcgaacttgccatgtccaca
ggcaagctagagttggcggaggaatgccttcttcaagcgaaggatttaagtggcttgttg
ctactgtactcatctcttggagatgctgaaggaattgaaaagcttgcttctttggcaaca
gaacatggaaaaaacaatgttgctttcctctgcctttttatgcttggtaaagtggaagat
tgcatacagttgcttgtagacagtaaccgtatacctgaagctgcattaatggcacgatca
tatcttcctagcaaagtaccagagatagtagcaatttggagaaatgacctcagtaaaatt
aatccaaaagctgcagagtctctagcagatccttctgaatatccaaatttatttgaagac
tggcaggttgctctaactgtagaaaaaaacattgcttctcagaggggtcattatcctcct
gctgaccagtacttgaatcatgctgagaagtcagacatgactcttgtggaagctttcaaa
aggatgcaggtcatggagcatgaggaacttgaagatgcagctgaggaaaatggagaacct
gatcaactggcattggaagagaatgaaatgcagaacacagatgatgctgatgaacctgaa
gagacagtttttgtaaatggggacgagggtgaggaacagcagggtacggacaatgaagga
gcttcgtctgcttag

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