KEGG   Miscanthus floridulus: 136530592
Entry
136530592         CDS       T10264                                 
Name
(RefSeq) coatomer subunit beta'-2-like
  KO
K17302  coatomer subunit beta'
Organism
mflo  Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mflo04131]
    136530592
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mflo04147]
    136530592
Membrane trafficking [BR:mflo04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    136530592
Exosome [BR:mflo04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   136530592
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR75_1st EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_HPS5 ANAPC4_WD40 PEP5_VPS11_N WD40_RFWD3 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_WDR75_2nd Beta-prop_Vps41 TPR_12 Beta-prop_WDR35_TULP_N TPR_1 HEAT_GCN1 TPR_CcmH_CycH TPR_8
Other DBs
NCBI-GeneID: 136530592
NCBI-ProteinID: XP_066379412
LinkDB
Position
Unknown
AA seq 925 aa
MPLRLDIKRKLAQRSERVKSVDLHPTEPWILSSLYSGSVCVWNYQTQTMVKSFEVTDLPV
RSAKFIARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQPFVLSSSDD
MLIKLWDWDKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTVKIWSLGSPDPNFT
LDGHSKGVNCVDYFTGGDRPYLITGSDDQTAKVWDYQTKSCVQTLEGHAHNVSAVCFHPE
LPIIITGSEDGTVRMWHSTTYRLENTLNYGLERVWALGYMKGSRRVVIGYDEGTIMIKIG
REVPVASMDSSGKIIWAKHNEIQTVNIKSVGADNEIADGDRLPLAVKELGSCDLYPQNLR
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEVVWSTDGEYAIRESTSRIKIHSKNFQ
EKKSIRPSFSAERIFGGVLLAMCTNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVTI
ASDTSFYILKYNRDVVSSHLDGGGSAGEEGVEDAFELLHEINERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTLFHLDRPMYLLGYLANQSRVYLIDKQFNVVGYTLLLSLIEYKTLVM
RGDFDRANDVLSSIPKEQYDSVARFLESRGMLEEALEIATDTNYRFDLAVQLGRLEIAKL
LCRRLPTEVQSESKWKQLGELAMSNGKLEMAEECLLHAMDLSGLLLLYSSLGDAEGINKL
ASVAKEQGKNNVSFLCLFMLGKLEECLQLLIESNRIPEAALMARSYLPSKVPEIVALWKK
DLQKVNPKAAESLADPNEYPNLFEDWQIALNVEAAVAPKRGIYPPAEEYMIHAERSNESL
VEAFKNMHVHEEMVPDDNEDTVHEVIEDGGVEESQEDAVEVDAEDDGVEESQDEAVEVEA
EGSTDGAVLVNGNSSEEQWVLTPEQ
NT seq 2778 nt   +upstreamnt  +downstreamnt
atgccgctccggttggatatcaagaggaagctcgcgcagaggtcggagagggtgaagtcc
gtggatctgcatccgacagagccatggattttgtcgagtctgtactcgggaagcgtttgt
gtatggaactaccagactcagacaatggtgaaatcatttgaagtcacggatttaccagtt
cgttcggctaaatttattgcacgtaagcaatgggttgttgctggtgccgacgatatgttc
atccgtgtgtacaactataacacaatggacaaggtcaaggtttttgaagctcacactgac
tacattaggtgtgtggctgttcatccaacccagccctttgtgctatcatcgtccgatgac
atgctgattaagctgtgggattgggataaaggctgggtgtgtactcaaatattcgaaggg
cattctcactatgtgatgcaagttacatttaacccaaaagataccaacacctttgctagt
gcttccctggatcgcacagtaaagatatggagtcttggttcccctgacccaaatttcaca
ctagatgggcattcaaaaggtgtgaactgtgttgattacttcactggtggtgatcgacca
tacttaattactggctctgatgatcagactgcaaaggtttgggactaccaaacaaagagc
tgcgttcaaacacttgaaggacatgcacataatgtgtctgctgtatgtttccatccagag
ctacctataataattactggttcagaggatgggacagttcgaatgtggcattctactacc
tacaggcttgagaacactcttaactatggccttgagcgagtttgggctttaggatatatg
aaagggtcaagaagggtcgtgatcggatacgatgaagggacaataatgataaaaattggt
cgtgaagttcctgttgctagcatggatagcagtggaaaaattatatgggcaaagcataat
gaaatccaaactgtcaatatcaagagtgttggtgcagacaatgagatcgcagatggtgat
cggttaccattggccgtgaaggagttgggaagctgtgatctttatccacaaaacttaagg
cacaatccgaatgggagatttgttgttgtatgtggagatggagaatacataatatacaca
gcattagcatggagaaacagatcatttgggtctgcacttgaagttgtttggtcaactgat
ggagaatatgccatcagagaaagcacctcgaggataaagatacacagtaaaaatttccag
gagaagaaaagtataaggccatcattttctgctgaacggatatttggtggagtattactt
gctatgtgtacaaatgacttcatttgcttctatgattgggcggaatgcagattgatacgt
cgaattgatgtcaatgtgaagaacctttactgggccgacagtggtgatttagtaacaatt
gcaagtgatacgtcattctacattttgaaatataatagggatgtagtttcatctcatttg
gatggagggggttcagctggtgaggaaggtgtggaagatgcctttgaactgcttcatgag
atcaatgaacgtgtccgcactgggctatgggttggcgactgtttcatctacaataattct
tcatggcggcttaattactgtgtaggaggagaggtcacaaccttgtttcacttggatcgg
ccaatgtatttactaggatatcttgcaaaccaaagccgtgtctatcttattgataagcaa
tttaatgtcgtggggtatactttactccttagtttgatcgagtataaaacacttgtaatg
cgtggggattttgatcgtgcgaatgatgttttatcatctataccaaaggaacaatatgac
agtgtggcacgtttcttggaatcacggggaatgttggaggaagccctcgagatagcaact
gacactaattacagatttgacttggctgtgcagcttggtcgacttgaaattgcgaagttg
ctttgcaggcgattgcctaccgaggtgcaaagtgagtccaagtggaagcaattaggggag
ttagctatgtctaatggaaagcttgagatggcagaggagtgtcttctacatgctatggat
ctcagtggtttgttgcttttgtattcttcccttggggatgccgaaggcattaacaaattg
gcatctgtagccaaagaacaaggaaagaacaacgtttctttcctttgtttattcatgcta
ggaaagctggaagagtgtcttcaattgctaatagaaagcaatcgtattccggaagcagca
ttgatggccagatcttatcttcctagcaaagtccctgagattgtagcattgtggaaaaag
gatctccagaaggtaaacccaaaagcagcagagtcgctggctgatcctaatgagtaccca
aacttatttgaagactggcagattgctctcaatgtagaagctgctgttgccccgaaaagg
ggtatctatccaccggccgaggagtacatgattcatgctgaaaggtcaaatgagagttta
gtggaagcttttaaaaatatgcatgtacatgaagagatggtaccagatgataatgaagat
actgttcacgaggttattgaggatggtggagtagaagagagtcaagaagatgctgttgag
gttgatgcagaggatgacggagtagaagaaagtcaagatgaagctgttgaggttgaggct
gagggttcaactgatggtgctgtccttgtgaatggaaacagtagtgaggaacagtgggtg
ctgactcctgagcaatag

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