Miscanthus floridulus: 136530711
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Entry
136530711 CDS
T10264
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
mflo Miscanthus floridulus
Pathway
mflo03013
Nucleocytoplasmic transport
mflo03015
mRNA surveillance pathway
mflo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136530711
09122 Translation
03013 Nucleocytoplasmic transport
136530711
03015 mRNA surveillance pathway
136530711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136530711
03041 Spliceosome [BR:
mflo03041
]
136530711
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
136530711
Spliceosome [BR:
mflo03041
]
Complex C
Other components
EJC/TREX
136530711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
136530711
NCBI-ProteinID:
XP_066379525
LinkDB
All DBs
Position
2:135860620..135865664
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AA seq
749 aa
AA seq
DB search
MPFCVSDSASRDLFDVTMSSYPVINNRPIDQWRVTDLKDELRKRKLPVKGLKEELVRRLF
DSIQSEREAEEADEDVGVNVDDQLPDANASEENTVTFTEVHQETAVHVTKQVEVPTTKVG
QESAISPTRGAPSVDVEEASTAKGEVPESFAGVNLTFEEVQVHTESTNEPVHEKTTDIDT
NEAVIFNDAIDVNSDLTPAEVKFGATEASKIEEQDFPPAPVDALTSDAAGPMDTDVVTAA
TSDAGPMDTDVVTTAPVSDDGEKLAPKDDLGNKVSMYDEEHNNSDTMNEDRKPIESIPNN
QIPEVSPDLGSQIKCESISSDNLSTNKKNNIEDNLNANNFDLELEVQPKMVEPSSGITSL
GGDLQPLDDDKELVKNQTSLEDLDSTANVDSYKKDSPEGDSPEKLNLDRSSGDESMEEDV
AEIKQVESNMKSYDLGGKNELNSEDVKEVILPDSVVEPSKEVIAEEKSAASAEKRKLDAE
EGVANTEPIKRQRRWTADVAKVPERQTLSQTGPETPKDIFQPAFKRSFGRSDSTASVDSP
KERIVPPSEKPATTSLRIDRFVRPFTLKAVQELLGKTGTVQDFWMDHIKTHCYVTFSSVD
EAVATRDTVYNLQWPPNNGNKLVAEFVDPQEVKLKVDPPPPPAAPISPAAATRAPPVQQT
QANQSVPRQAATPKEQLPPPPPLSKPPIADPAALARERLPPTPKEPEPPVVTLDDLFKKT
QSSPRIYYLPLSEEEVAAKLAAQGKGKKE
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgcccttctgtgtctccgacagcgcctcgcgcgatttgtttgacgtcaccatgtcatcg
tatcctgtgataaacaaccgaccaatcgatcagtggagagttactgatctgaaggatgag
ctccgtaaaaggaagcttcctgttaaaggcttgaaagaggaactcgttaggcgactcttt
gactccattcagagtgaaagagaagctgaagaagctgatgaggatgtgggagtgaatgtg
gatgatcagttacctgatgccaatgctagtgaggaaaatacagttacctttacagaagtt
catcaggaaactgcggttcatgtcactaagcaagttgaagttcctacaaccaaagttggt
caggaatccgctatttctcccactagaggggcccccagtgttgatgttgaagaggcctca
acagccaaaggagaagtacctgaatcatttgctggagtaaatttgacatttgaagaagtg
caagtgcatactgaaagtactaatgagcctgttcatgagaagaccacagacattgacacc
aatgaggcagtcattttcaatgatgcaatcgatgtgaattcagacttgacccctgctgaa
gtcaagtttggtgctacggaagcaagcaaaattgaagaacaggattttcccccagcacct
gtagatgccttaacttcagatgctgctggtcctatggatactgatgttgtcacagctgca
acttctgatgctggtcctatggatactgatgttgtcacaactgcaccagtgagcgacgat
ggggagaaactggcacctaaggatgatttgggtaacaaggtgtcaatgtatgatgaagag
cacaataattctgataccatgaacgaggaccgcaagcccatcgaatcaataccaaataat
cagatacctgaggttagtccagatttagggtctcaaattaagtgtgagtcgatttctagt
gataatctatcaactaacaaaaagaataatatagaagataatttaaatgctaataacttt
gatttagaactagaggttcagccgaagatggtcgaaccatcatccggcattacttcatta
ggtggagatttgcagccactggatgatgacaaagagctggttaagaaccagacatctttg
gaggacttagattccacagctaatgtggactcatacaagaaagatagtcctgaaggtgat
tctccagagaaattaaatctagacaggagttcaggtgatgagtcaatggaggaggatgtt
gcggaaattaaacaagttgagtccaatatgaaatcttatgatctcggaggaaagaatgaa
cttaactcagaagatgtgaaagaggtgatcctccctgattctgttgttgagccttccaag
gaggttatagctgaagaaaagtcagcagcttcagcagaaaagaggaaacttgatgctgaa
gaaggtgttgcaaacactgaaccaatcaagcgacaacgtcggtggactgcagacgtcgcc
aaagttccagagagacaaacattgagtcaaactggtcctgaaactcctaaggatattttt
cagcctgctttcaaacgatcttttgggaggtctgattcaacagccagtgtagattctcct
aaggagcggattgtaccaccttctgagaaacctgccacaacttctttgagaattgaccga
tttgtacgcccatttaccctgaaagctgtgcaggagcttcttggtaaaactggaactgta
caagacttctggatggaccatatcaagactcattgctatgttacattttcttcggtggat
gaagctgtggctactagggatactgtttacaacctacagtggcccccaaacaatggcaat
aagttggttgctgaatttgttgatcctcaggaagtgaagctcaaggttgacccccctccc
ccgccagctgctcctattagcccagctgctgccacaagggcacctcctgttcaacagacg
caggctaatcaaagtgtgccgcgccaggctgctacaccaaaagagcaactgccacctcca
cctcccctttctaagccccctatcgctgaccctgcagcattagcgagagagaggcttccg
cccactccaaaggagccagagcctcctgttgtgacacttgatgatctcttcaagaagaca
cagtcctctccgaggatctattatctgcctttatcagaagaggaggtggctgccaagctc
gctgcacagggcaaaggaaaaaaggaatag
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