Miscanthus floridulus: 136530774
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Entry
136530774 CDS
T10264
Name
(RefSeq) fanconi-associated nuclease 1 homolog isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
136530774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136530774
Enzymes [BR:
mflo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
136530774
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
136530774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_TPR
FAN1_HTH
HIRAN
Sgf11
Cys_rich_KTR
Motif
Other DBs
NCBI-GeneID:
136530774
NCBI-ProteinID:
XP_066379599
LinkDB
All DBs
Position
Unknown
AA seq
990 aa
AA seq
DB search
MLTGRESLVRLIGRRRRSPLPASLAAVLSLSSPSPSASLAQADDGGGSGEAAGGEAGSTS
GGSGVVGVGAEWVVCPVCGDSIRGSDYCVNTHLDMCLTRGTKRKLTQSTLLNFRFSKKVS
AEPTANNLNNEIETENMKQIDEDLSSDQAFFTFDSEIGSSNAGTTISSPTCLNGLLGTSE
TITSYAPSKIVLPNVKDAENDGAGELPTVATSCSFDECAVMDSSTVVAVDTVIVGRRFHE
NIELREDAVITFLRDPQNARDPDAIKVLYAGSECEQTLGYLPRDLAEVLVPLVDKHYVEC
KGFVVGLHEQQFGNVPIQITIQKCKSDNQINDDPNYCQSLWENFVTTVKSEKFRRPRSAR
YQTNFNLMMADVMANHAHVFSDIEKSFLASFKSLSDDGQRLFVRIYTRKGPWFRKSSISY
QEISDLEHAVMELKLAGYIDMLSCTVDPSEYDMKEILDVLSVPEMKEILKELPKDNTSCT
RRHELVSTLLSSYHNGTCASLPKRILKWTGTCIRISKMADELLWRIQRLFFLNGDQDLSS
FLLVEFGVVKFPDYVCSISHRIFQAPPPPPPPPPPPPFKTTVSHSSIVFFNILHCKQAIR
VAQVMDESLDNNNMDLVTRCIDLSENQLCTMPKQENATTPECLPSFFSRFSASWVYSKIL
TLGVSVYERDRRYEDAIRILKILLSKVACDRRRGYWALRLSIDLEHVGRANESLSTAEGG
AIDPWVHAGSKFALQRRVLRLSKPPRRWKVPSYADYVKRSIREVSIEGRPLNCETGANNV
FYGYDGELCGVEQLALQYYADEGGGWQGTHSEGGIWMAIFGLLMWDVMFSDIQDVFQSKF
QTAPLDLETDDFYKSRKDLAESRLKKIQDGMAEEMLISSWELHQGTSCQGVNWVRYSLTD
LPAVVACIGGHRLASLLCHLAVDYRSWSSGMPDLLLWRFLDERGGGEAKLVEVKGPRDLL
SEQQRAWILVLMDFGFDVEVCKVSPVTKRR
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccgggcgggagagcctggtccgcctcatcggccggcgccgtcgctcccctctc
cccgcctcgctcgccgccgtcctatccttatcctccccttccccctccgcctccctcgcc
caggccgacgatgggggcggctcgggagaagcggctgggggtgaggctggttcgacgtct
ggaggaagcggcgtcgtcggcgtgggcgcggagtgggtggtctgccccgtctgcggcgac
tcgatccgagggtcggactactgcgtcaacactcacctcgatatgtgccttacaagagga
accaaaaggaagttaacacagagcacccttcttaatttcagattcagtaaaaaggtttcc
gctgagcctacagcaaacaatttgaacaatgagatcgagacagaaaatatgaaacagatt
gatgaagatttgtcgagtgatcaagcattcttcacattcgatagtgagattgggagttca
aatgctggcactactatttcatcgcctacctgtctgaatggcttacttggcacttctgag
actattacttcttacgcaccttcaaaaattgtcttaccaaatgtaaaggatgctgaaaat
gatggcgcaggggaacttccaactgtggcaacctcttgcagttttgatgaatgtgcagtc
atggattctagcaccgttgtagcagttgacactgtcatagttggtcggaggttccatgag
aacattgaattaagagaagatgcagtcattacctttctgagagatcctcagaatgctagg
gaccctgatgctataaaggtgctttatgcagggtctgaatgtgagcagacgcttggatac
ttgcctcgagatctcgctgaagttttggttcctctagtggacaagcattatgttgaatgc
aagggatttgtagttggtttgcatgaacagcagtttggcaatgttcccatccagattact
atccagaaatgtaaatctgacaatcagataaatgatgatccaaattattgccaatccttg
tgggaaaattttgttaccactgttaaaagtgaaaaattccggagacctcgcagtgcaaga
tatcagacaaatttcaatttgatgatggctgatgttatggctaaccatgcacatgtcttt
agtgatatagaaaaatcatttttagcttcttttaagtcgttatcagatgatgggcaacgg
ctttttgtcaggatctacacccgaaaagggccatggttccggaagagcagcatctcatat
caagagatatcagatctggaacatgcagtcatggagttgaagttggcaggttatatcgac
atgctttcttgcaccgttgatccttctgaatatgatatgaaggagattcttgatgtgtta
agtgttcctgaaatgaaggaaattctcaaggagcttcctaaggataacacaagctgcaca
cgtcgacatgagcttgttagcacccttctgtcttcgtaccataatggtacctgtgcatca
ctaccaaagcgaatcctaaaatggactggaacctgtataagaatttctaagatggcagat
gaacttctgtggcgtatccagaggctcttttttctaaatggtgatcaagatctttcttca
tttctattagtggaatttggtgtagtgaagtttccagactatgtttgcagcatctctcat
cgcatttttcaagcccccccccccccccccccccccccccccccgccccctttcaaaaca
acagtgagccactcatcaatcgtgttttttaatatcttacattgcaaacaggctattcga
gttgctcaggtgatggatgaatcccttgataataataacatggacttggtgacaagatgc
atcgatttatctgagaatcaattatgcactatgccaaaacaagaaaatgcaactacacct
gaatgtctcccatcattcttttctcgcttttcagcttcctgggtctattcgaaaatactc
acattaggtgtctccgtttatgaaagggaccgcaggtatgaagatgcaataaggattcta
aagatactacttagtaaagttgcttgtgatagacggcgaggatattgggcactgaggcta
tccattgatttggagcatgtgggtcgtgcaaatgagagcctttccacagctgaaggagga
gcaattgatccatgggtccatgctggttcaaagtttgcgctgcaaaggagagtgctgcgt
ttaagcaaacctccacgacgctggaaagttcccagttatgctgattatgttaagagaagt
ataagagaggtaagcattgaaggaaggccattgaattgcgagacaggagcaaataatgta
ttttatggttatgatggggaactttgtggggtagagcagttggctttacaatattatgct
gatgaaggtggtggttggcaaggtacccattcggaaggtggcatttggatggctatcttt
ggccttctaatgtgggacgtaatgttttcagacatacaagacgttttccagtctaaattc
cagacagccccccttgatctggaaacagatgacttctacaaatctagaaaggaccttgca
gaatctcggttgaagaagatacaagatggaatggctgaagagatgctcatcagctcctgg
gagctacatcaggggacatcctgccaaggtgttaactgggtccgttattcgttaactgat
ctaccggctgtcgttgcatgcattggtggccatcgcttggcatcgctcctctgccatcta
gcggttgattacaggagctggtcgagtggaatgcctgatctgctgctatggcgtttcctt
gatgaaagaggtggaggtgaggctaaacttgtggaggtcaaaggaccaagggacctgctg
tcagagcaacagcgtgcatggattcttgttctcatggattttggattcgatgtggaagtt
tgcaaagtaagcccggttaccaagcggagatag
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