Miscanthus floridulus: 136530985
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Entry
136530985 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136530985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mflo03041
]
136530985
03009 Ribosome biogenesis [BR:
mflo03009
]
136530985
Enzymes [BR:
mflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
136530985
Spliceosome [BR:
mflo03041
]
Complex A
U1 snRNP components
U1 related factors
136530985
Complex B
136530985
Ribosome biogenesis [BR:
mflo03009
]
Eukaryotic type
Pre-60S particles
Helicases
136530985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
136530985
NCBI-ProteinID:
XP_066379785
LinkDB
All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MSRYDGRAADAGSYRDRRSEGAFGGGSRAFAAPSKADAFAAASELDGLPRFEKNFYVESP
AVAGMTEEEVEAYRRRREITVEGRDVPKPVLEFRDVGFPEYVLQEITKAGFVEPTPIQSQ
GWPMALRGRDLIGIAETGSGKTLAYLLPAVVHVNAQPILAPGDGPIVLVLAPTRELAVQI
QQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMIESHHTNLRRVT
YLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQLARNFLFDPYKVTIG
SEDLKANHAIVQHVEILSESQKYNKLVNLLEDIMDGSRILIFLDTKKGCDQITRQLRMDG
WPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDY
VHRIGRTGRAGAKGTAYSFFTAANARFAKELISILEEAGQKVSSELAAMGRGAPPPSSGY
RDRYRGYGGGRSWS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctacgacggccgcgctgcggacgcgggctcctaccgcgaccgccgcagcgag
ggggcgttcgggggcgggtcgagggcgttcgcggcgccgagcaaagcggatgctttcgcg
gcggcctcggagctggatgggctgccgcgcttcgagaagaacttctacgtggagtcgcct
gcggtagccggcatgacggaggaagaggtggaggcgtaccgccgccgccgggagattacc
gtcgagggccgcgacgtgcccaagccggtgcttgagttccgtgatgtcggcttcccagaa
tatgtgttgcaagaaattacaaaagctggttttgtggaacctactcctatccaatcgcaa
ggttggccaatggcactgaggggtcgtgaccttattggcattgcagagacaggatcaggg
aaaactcttgcttaccttttacctgcggttgttcatgtgaatgctcagcctattcttgcc
cctggcgatggtccaatcgtcttggtgttagctcctacacgtgaacttgctgttcagata
cagcaagaagcaaccaagtttggtgcatcatcaaagataaaaagtacttgcatatatggt
ggtgtgccaaaaggtccacaagttcgtgatcttcaaaaaggtgttgaaattgttatagcc
acaccaggacgactaattgatatgatagaatcacatcatacaaacttgcgaagggtcaca
tatcttgttttagatgaagcagaccggatgctagatatgggatttgaacctcagattaag
aaaattgtttctcagattcgtccagatcgtcaaacactttactggagcgctacatggcca
aaggaagttgagcagttagcaaggaatttcctttttgacccatacaaggtcactattggt
tctgaagacttgaaggctaatcatgctattgttcagcatgtagagatactatctgagagt
cagaagtataacaagctggttaatctactggaggatataatggatggtagccgaatttta
atatttctggacaccaagaagggatgcgatcagattactagacagcttcgaatggacggt
tggcctgctttgtctatccatggtgacaagagccaagcagaacgggattgggtcctttct
gaattcaagtcagggaaaagtcctattatgacagccactgatgttgctgctcgaggctta
gatgtcaaggatgtgaagtatgtcattaactatgactttccagggtcgcttgaggattat
gttcatcgtattggtcgaactggcagagcaggtgcaaaaggaacagcttactcctttttc
actgcagctaatgccagatttgccaaggaacttattagtattctggaagaagctggacaa
aaggtcagctctgagttagctgctatgggtcgtggtgcacctcccccttcttcaggttac
cgtgatagatatagggggtatgggggtggccgatcctggagttga
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