Miscanthus floridulus: 136531012
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Entry
136531012 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136531012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136531012
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136531012
Enzymes [BR:
mflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
136531012
Messenger RNA biogenesis [BR:
mflo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
136531012
DNA repair and recombination proteins [BR:
mflo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
136531012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
136531012
NCBI-ProteinID:
XP_066379812
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MDAVLKYFGFSSLRPYQRDVVDAVRRGRDYLVVIATGGGKSMCYQLPLLLTKKTAIVISP
LLSLMQDQVMNLQQRGVRSDYLGSTQKNHAVVMNYAQSVTITHHSNRVTLSFWSNMIRRG
ICLLVVDEAHCIPEWGPDFRIEYKMLHRLRAKLFGIPFLALTAMATDRPGTCINEAIAEL
IRDVPHRVSARESTIIYCITIRDTEQPGLFFVHDALKSLGVDAKMYHGQMDSALREAAHK
SFVTDEVFVMVATIAFRMDIDKPDVRCVIHFGCPKSLESYYQESGRCGQDGLPSTCLLYY
SRSDFSRGDFYCAATNTVTQKEVIMSSFFAAQSYCVLATCRRQHILNYFREAGGDNCGYC
DNCTSRADKEKDLSTGNECGGRWGLNFHINMLRGSHCKKVITNNFQNSEFYGLGKSREAN
WWKGLGGILLANGYLNQIINGSYRFVSISADGEKFLHSYHYSGHPLILRVTDEMLSDDDY
STSSDPEIAPELDFLSKVW
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgttcttaagtattttggtttttcatccctacgaccataccagcgtgatgtt
gtggacgctgttagaaggggccgtgactatttagttgtcattgctactggtggcggcaaa
tcaatgtgctaccagcttcccctgttattaacaaaaaagactgcaattgtcattagccca
ttgttgtccttaatgcaagaccaggtcatgaacttgcagcaaagaggggtgcgttctgac
tatttaggaagcacgcaaaagaatcatgctgtagtaatgaactacgctcaaagtgtaaca
attacccaccattctaatcgtgttactctcagtttttggtctaacatgatccgtcgtggc
atttgtctgttggtcgtggacgaagcacattgcatacctgagtggggccctgatttcagg
attgagtacaaaatgctccatcgtttaagagctaaattgtttggtatcccatttttagca
ttgactgcaatggctactgatagacccggcacatgcattaacgaagcaattgctgagttg
atacgagatgttcctcatcgggtatcagcccgtgaatcaactataatatattgcatcaca
atacgtgacaccgagcagcctggtttattttttgtacatgatgctcttaaatctcttggt
gttgatgcaaaaatgtatcatggacagatggatagtgctttaagagaggctgcacacaag
tcatttgttactgacgaggtatttgtcatggtggccactattgcctttcgtatggatata
gacaagccagatgtcaggtgtgttattcattttggctgccccaaaagccttgagtcatac
tatcaagagagcggtagatgcggacaagatggtttgccttcaacatgtttgctttattat
agccgaagtgatttctctaggggtgatttttattgtgctgcaactaatacagtgactcaa
aaagaagttatcatgtcatctttctttgctgcccaaagttattgtgtccttgctacatgc
cgtcgccaacatattcttaattattttcgtgaagctggtggtgacaattgtggttattgc
gacaattgcacatcaagggccgacaaggagaaagacttatcaaccggcaatgagtgtggt
ggacgttggggcctaaacttccatatcaacatgcttagaggatcacattgcaagaaggtt
ataaccaacaatttccaaaattctgaattctatggccttgggaaatcacgcgaagccaac
tggtggaaaggtctaggtggaattttattagccaatggttatcttaatcaaatcatcaat
gggtcatacagatttgtcagcatatctgctgatggagagaaattccttcactcctaccat
tactctgggcatcctctcatcttaagggtcacagatgaaatgttgtctgacgatgattac
tccacgtctagtgatccggaaatcgctcctgagctcgattttctttcgaaagtatggtag
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