Miscanthus floridulus: 136531121
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Entry
136531121 CDS
T10264
Name
(RefSeq) chromatin-remodeling ATPase INO80-like
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
mflo Miscanthus floridulus
Pathway
mflo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
136531121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mflo03036
]
136531121
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
136531121
INO80 complex (yeast)
136531121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
136531121
NCBI-ProteinID:
XP_066379935
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All DBs
Position
2:complement(139401803..139414474)
Genome browser
AA seq
1510 aa
AA seq
DB search
MDPRRAPPRGGGANGGGGLSYSTLFNLEPLLNFRVPVPEDLARYGNSSSNGSPSSEGQGS
LLDQYNGVNDASHGLHRKRKRHLYGASDDDEADAYSNKITEEHYRAMLSEHVQKYRRSKF
KEGAFSSDPPRVATPQIKHKNGGKKTMKHASDFRDVATLDGIEASHEYNGIECVKTHGGF
NKLVASLDSTYLDMGDNIRYLVPEGYDKLASSLNLPVSSDIHVEEHFLKGMLDLRTLAAM
LGTDQKFEASNRGGLSEPLPQFGSLKERVKVQKFSLQVTEDPFAIPEGAAGRIRRSIISE
AGNLQVHYVKVLEKGDTYEIIERSLPKKQIVKKEPSVIVKEESEKTYKLWQSLATKSIPK
HHRNFTALMKKRQVDAKRFSDSCQREVKLKVSRSLKLMRCAAIRTRKLARDMLIFWKRVD
KEQYELRKKEEREAAEALKREEELREAKRQQQRLNFLLSQTELYSHFMQNKGGGSAPPDE
EDVPDEDEEEDPEEAQLKREALRAAQHAVSQQKMKTNAFDSEIVRLRQTSESVLPTDDSS
SMDPSKIDLLHPSTMPEKSSVQTPELFKGVLKEYQLKGLQWLVNCYEQGLNGILADEMGL
GKTVQAMAFLSHLAEDKNIWGPFLVVAPASVVNNWAEELIRFCPDLKILPYWGPERMVLR
KNINPKRLYRRDASFHILITNYQILVNEEKLLRRVKWQYMVLDEAQAIKSSSSQRWKTLL
SFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIEGHAEHGGALNE
HQLSRLHAILKPFMLRRVKIDVIAEMTKKKEEIVPCKLSSRQQVFYQAIKNKISLNELLD
GSRGNLNDKKLLSLMNIVMQLRKVCNHPELFERNEGSSYFYFADIPNSLLSPPFGELQDV
HYAGKRNPIIFEIPKLVYEGIICNTENSGNICGFQNGYLNRLFNIFLPSNIHRSAIPEVN
SSIESVLSSGAFGFTRLSNLCPVEASFLATASLFERLAFSVMQWNRNYTDEIMDAFLDSE
DPDIQSSQNDSTKVHAVARLLLSSTKAKPSLLRTKIGTGPSDSPYEALVLSHRDRLASNI
RLLRSAYAFIPPARAPPINVWCADRNFAYKFTYEMHDPWAKKLFLGFARTSEFNGPRRPV
ALHPLIQELNTDLPNLEPMLQLPYRIFGSSPPMSNFDPAKMLTDSGKLHTLDMLLRRLRA
EGHRVLLFAQMTKMLDILEDYMNFRKFKYFRLDGSSAISDRRDMVRDFQNRNDVFVFLLS
TRAGGLGINLTAADTVIFYEIDWNPTQDQQAMDRTHRLGQTKEVTVYRLICKDTIEEKIL
QRAKQKNAVQELVMKGKHVQDDHLMRQEDVVSLLIDDTQIAHKLKEISMQAKDRQKKRRA
KGIKVDKEGDLTLEDLDDATAAATAEADQDKTTSKKKKSSHKKHTNTHDNDNTDKNVEPN
VGDHPGSSHTENEQIAEPRPKRSKRLMKSITDDKELAAAAVDHEEPANEAENHRAHDYDR
TEEVQDGTPA
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atggatccgcgccgcgcgcctccgcggggcgggggcgctaacggcggcggcgggctctct
tactccacgctgttcaacctcgagcctttgctgaacttcagggttcctgtaccagaagat
cttgcccgctatggtaatagcagctcaaatgggagtccaagcagtgaaggtcaaggatcc
ttgttggatcagtacaatggtgtaaatgatgcttcccatggcctgcatcggaagcgaaaa
aggcatctttatggtgccagcgatgatgatgaggcagatgcctatagtaacaaaataaca
gaggagcactaccgtgctatgctcagtgaacatgtgcagaagtaccggaggtcaaagttc
aaggagggtgcttttagttctgatcctcctcgtgtggcaaccccccaaataaaacacaaa
aatggtggtaaaaaaactatgaagcacgcaagtgatttcagggatgttgcgacattagat
gggatagaagcctcacatgagtataatgggatagaatgtgttaaaactcatggtggtttt
aataagcttgtagcatcccttgattcgacctatttagatatgggggataatatacgctac
ttagttccagagggttatgataagttagcatcatcccttaatctccctgtttcttctgat
atacatgtcgaggaacacttcttgaagggcatgcttgatttacgcaccctagcagcaatg
cttggtactgaccaaaagtttgaggcttccaatcgtggtggattatctgaacccctgcca
caatttggatctctcaaggaaagggtaaaggtgcagaaattttctctgcaagttaccgag
gacccctttgcaattccggaaggagcagctgggaggatacgaaggtctattatatcagaa
gctggcaatttgcaggttcattatgtcaaagtcttggaaaaaggagatacatatgagatt
atcgagcgtagcttaccaaagaagcaaatagtaaagaaggaaccttctgtaattgtgaaa
gaagagtctgaaaagacttacaaactatggcagtctcttgctaccaaaagcatcccaaag
catcacaggaattttactgctttgatgaagaaacgacaagtagatgcgaagcgcttctct
gatagttgtcaacgagaggtaaagctcaaagtaagcaggtcactgaaactgatgaggtgt
gctgcaatacgtacaaggaagttggctagggacatgctgatattttggaaacgtgtagac
aaagaacagtatgagttaaggaaaaaagaggaaagagaagctgctgaagctttgaaacgt
gaggaggagctacgtgaagccaaaagacagcaacagaggctaaactttctgctgtcacaa
acagagctttacagtcatttcatgcagaacaagggtggtggctcagcaccgcctgatgag
gaagatgtccctgatgaagatgaagaagaagatcctgaggaagctcaattgaaaagagag
gccttgagagcagcacagcatgccgtctctcaacaaaagatgaagacaaatgcatttgat
agtgaaattgtgaggcttcgtcaaacttctgagtctgttcttccaactgatgattcatct
agcatggaccctagcaagattgatctattacacccctcaacaatgcctgagaagtcatct
gtgcagacaccggagttgtttaagggtgtattgaaagaatatcagttaaagggcttacag
tggctggttaattgttatgaacaggggttgaatggcattcttgctgatgagatgggtctt
ggcaaaactgttcaggctatggcattcctgtctcatttggctgaggacaaaaacatatgg
ggcccctttctagtggtggctcctgcatctgttgtgaataattgggctgaggagttgatt
agattctgccctgacctaaagatacttccttactggggcccagagaggatggttcttcga
aagaatatcaaccccaagcgtctgtatcgcagagatgctagcttccacattcttattaca
aactatcagatacttgtgaacgaagagaagcttttgagacgtgttaagtggcaatacatg
gtactggatgaggcccaggctatcaaaagttcaagcagccagcgctggaagacattactg
agcttcaactgtagaaaccgtctacttcttactgggacaccaatacagaacaatatggct
gagttatgggcacttcttcatttcatcatgcccactctatttgacagtcatgaacagttc
aacgagtggttctcaaagggtattgagggtcatgctgagcatggaggagctttgaatgaa
catcagcttagtagattacatgctattttgaagccctttatgctccgccgggttaagatt
gatgtcattgctgaaatgaccaaaaagaaagaagaaattgttccctgcaaattgagttct
cgtcaacaagttttctatcaagctataaaaaataagatctcgcttaacgagttgcttgat
ggaagtcgtggcaatctaaatgacaagaagctacttagcctgatgaatattgtcatgcag
ctacggaaggtctgcaatcacccagagctgtttgagcgcaatgagggaagctcttacttt
tactttgctgatatcccaaactcacttctttctcccccatttggggaattacaagatgta
cactatgcaggcaagagaaaccctataatctttgagattccaaagttagtttatgaggga
atcatctgcaacacagaaaattctggaaacatctgtggatttcagaatggatatttgaac
aggctgtttaatatatttttgcccagcaatatccatcgctcagccattccagaagttaat
tcatcaattgagtctgttctatcatctggtgcatttggctttacacgtttgtcaaatctg
tgcccagttgaagcttccttcctggccactgcttctttatttgagagactagcgttttca
gtaatgcaatggaataggaactacactgatgaaattatggatgcatttcttgattcagaa
gatcctgacatccagtccagtcagaatgattccacaaaagttcatgcagttgcccgattg
ttgctttcttctacaaaggccaagcccagtttgcttaggacaaagattgggactgggcca
agtgatagcccatatgaggcactggtgctttctcatcgtgacaggcttgcttcgaacata
aggcttcttcgttcagcatatgcttttattccgccagctagagcaccacctataaatgtt
tggtgtgctgatcgaaattttgcctataagttcacctatgagatgcatgatccttgggcc
aagaaactgttcctgggatttgctcgtacttctgagttcaatggtcctagacgaccagtt
gctcttcatcctttgattcaagaactcaatactgatttgcccaaccttgagccgatgctg
cagctaccctataggatatttgggtcttctccaccgatgagtaattttgatccagctaaa
atgctcaccgattctgggaagctccacaccttggatatgctactacggcgccttcgagct
gaaggtcatcgcgtgcttctttttgctcagatgactaaaatgttggacattcttgaggat
tacatgaatttcagaaaatttaagtatttcagacttgatgggtcttctgcaatctcagac
cgccgtgacatggtccgagatttccagaataggaatgatgtatttgttttcttgttaagc
acaagagctggggggcttggtattaatttgactgctgctgatactgttattttttatgaa
attgactggaatccaacacaagaccagcaggcaatggatagaacgcacagacttggtcaa
acaaaggaggtaactgtgtacaggcttatatgcaaagatactattgaggagaaaatattg
caaagagcaaagcagaaaaatgcagtgcaagagttggttatgaaggggaaacatgtccag
gacgatcatttgatgagacaagaggatgttgtttcattacttattgatgacacacagatt
gcacataagttgaaagaaatatccatgcaggcgaaggatcgacaaaagaaaagacgagct
aagggcatcaaggttgacaaagaaggagatttgacactcgaagacttggatgatgctact
gctgctgctactgcagaagcagatcaagataaaacaaccagcaaaaagaaaaagagctcc
cacaagaaacatacgaatactcatgataatgacaatacggacaagaatgtagagcctaat
gtgggagatcatccggggagtagtcacacagaaaatgaacagatcgccgaaccaaggcct
aaaagatcaaaaaggctgatgaagagcattactgatgacaaggaattagctgctgctgct
gtggatcatgaagaaccggcaaatgaagcggaaaatcacagagctcatgactatgatcgt
acagaagaggttcaagacggcactccagcctaa
DBGET
integrated database retrieval system
