Miscanthus floridulus: 136531496
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Entry
136531496 CDS
T10264
Name
(RefSeq) nuclear pore complex protein NUP93A-like
KO
K14309
nuclear pore complex protein Nup93
Organism
mflo Miscanthus floridulus
Pathway
mflo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136531496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136531496
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
136531496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TPR_14
TPR_12
TPR_2
TPR_8
Clathrin
TPR_1
Motif
Other DBs
NCBI-GeneID:
136531496
NCBI-ProteinID:
XP_066380240
LinkDB
All DBs
Position
2:complement(142946020..142954723)
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AA seq
872 aa
AA seq
DB search
MAGVGGSGGGGGGDAEMGGWTGLLHSSAKLLEQAAPTPHFPPLQRNLDQLEALSTKLKAK
TIRAEAPSQSLSATRLLAREGINAEQLARDLKSFELKTTFEDVFPSEATTVEEYLQQLHE
MAIVSSIQEAQKDNLRSFNNYMMQVLEDDWQKEKRDFLQSLSRLSTLPKRNTNLSTSGLA
RPALMPPSTSNLHAPSGLPSAEVMPIPNKTIIEKKSSVYAVVVRDLNDARGRSLPFNPAT
VFRAAYESLSVDAVGTKSVTMQKVWHLIQALVGEGSTHRIGSRKMSLVVGARRHLEWGHE
KYILETINSHPALAALGGSVGNLQKIRAFLRVRLRDQGVLDFDATDLRRQPPVDTTWQQI
YFCLRTGYYDEARQVAQSSRTAYNFAPLLADWISTNGAVSPETALSASEECDKMLRMGDR
PGRPGYDRKKLLLYAIICGCRRLIERLLKDLPTLFNTIEDFLWFKLSALREYTNASSSNL
MNEGLVPYTLDDLQSYLNKFEPSYYTKSGKDPLVYPYILFLSIQLLPAILYLSKEVGEDG
YHVDAVHISIALADHSVLPDGVGSGQKIGVMDACAEAASIIRQYGSIYLRNGNIDLALEY
YAQAAAAMGGGEVSWMVEGQADKQRQRSLMLKQLLTEILLRDGGIQLLLGPNGMGEEGEL
KKYMMDWRSRQQFLLEAAHRCQEAGLYDKAVEIHKRVGAFAMALQTINKCLSDAVCAMAR
SMLDGESRAAALIHSGNEILETARYSSEASIQEKDLISEQQTVLRQLEAILHIYRLARAG
QTVDALRETIRLPFLHLDTQAPNVTVDIFRNLSPHVQACVPDLLKVALNCIDNVRDTDGT
LRTVKSKIANLVASNMSRNWPQDLYQKVAQCI
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgtcggtggcagcggcggtggaggtgggggcgacgcggagatgggcggttgg
acggggcttctccactcctccgcgaagctcctcgagcaggcggcgcccaccccgcacttc
cctccccttcagaggaacctagaccagctcgaggcgctctccaccaagctcaaggcgaag
accatccgcgctgaggctccgtcccagtcgctctccgccaccagattgctagcacgcgag
gggatcaatgccgagcagctcgccagggacctcaaatcattcgaactcaagacaaccttt
gaggatgtttttccatctgaagcaactactgttgaggagtacttgcagcagcttcatgaa
atggccatagtttcatccatccaagaagctcaaaaggacaacttaaggagttttaacaac
tatatgatgcaagttcttgaggatgactggcagaaagagaagagagatttcttgcagagt
ctaagccggctttctacattacccaagagaaacactaatctctcgaccagtgggctggct
cgccctgctttaatgccaccatcaacttccaatcttcatgctccatcaggcctgccttct
gcagaagtcatgcctataccgaacaagaccattatcgaaaaaaaatcttcagtttatgct
gtggttgtgagggacctcaatgatgctagaggacgcagtctaccttttaatcctgctacg
gtttttagggctgcttatgagtccttgtctgttgatgctgttggcacaaagtcagtgact
atgcagaaagtgtggcatctaattcaggcattagttggggaagggtcaactcatcgaatt
ggttcaagaaaaatgtcactagtggtaggtgcaaggcgccatcttgaatggggtcatgag
aagtacatacttgagaccatcaacagccatccagctcttgctgctcttggtggatctgtt
ggcaatcttcagaagatccgagcatttcttcgggtaaggctgcgggatcaaggtgtgcta
gactttgacgcaaccgatctacgcagacagcctccagtggatacaacctggcagcagatt
tatttctgcttgagaaccggatactatgatgaagcaagacaagttgcccaatcatctcgt
actgcatataacttcgctcccctgcttgcagattggatttctactaatggtgctgtatca
ccagagactgctctgtcagcttctgaggaatgtgataaaatgctcagaatgggtgatcgg
ccagggcgtcctggttatgacaggaagaagttgctgctttatgccataatttgtggttgt
cggcggctaattgaaaggctgctaaaagacctgccaacactttttaacactatagaggat
ttcttgtggtttaagttgtcagctctgcgggaatacaccaatgcatcttcttctaatctt
atgaatgaaggcttggtgccttatacgctggatgacctgcaaagttacttgaataaattt
gagccatcatattatacaaagagtgggaaagatcccctagtctatccctacattctgttc
ttaagcatccaattactcccagcaattctttatttgtctaaagaagttggagaggatgga
taccatgttgacgctgtacatatttcaatcgctttagctgaccatagtgttctccctgac
ggtgttggatcaggccagaaaattggtgtcatggatgcctgcgcagaggctgcaagcata
atacggcagtatggctctatatacttgcgtaatggtaatattgatttggccttggaatat
tatgcacaagctgctgctgccatgggtggaggtgaggtatcgtggatggttgaagggcaa
gctgataagcagcgacaacgaagtttgatgttgaagcaactactgacggagatattacta
agggatggtggtattcaacttttgcttggtccaaatggaatgggagaagaaggagagctg
aaaaagtacatgatggattggagaagtaggcagcaattcttacttgaagctgcccatcgg
tgtcaagaggctgggctctatgacaaagctgtggaaattcacaaaagagtaggagccttt
gccatggctcttcagacaataaacaagtgcctgtctgatgcagtctgtgccatggcacgg
agtatgctggatggcgagagtcgtgctgctgccttaattcattctggcaatgaaatttta
gagacagctagatattcttctgaagccagtattcaagagaaggatctcatttctgaacaa
caaactgtgctgagacagcttgaagctattctccatatttataggctagctcgagctgga
cagactgtagatgctttgagggaaaccatcaggctacccttccttcatctggacactcag
gctccaaatgtgactgtggacattttcaggaacttgtcaccccatgttcaagcttgcgtg
ccagatctcctgaaggttgctctaaattgcattgacaatgttagagatactgatgggacc
ttgcgcactgtcaaatcaaagattgcaaaccttgtagcaagcaacatgagccggaattgg
ccacaggatttgtatcagaaggtggcacagtgcatatga
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