KEGG   Miscanthus floridulus: 136532114
Entry
136532114         CDS       T10264                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1-like
  KO
K14962  COMPASS component SWD2
Organism
mflo  Miscanthus floridulus
Pathway
mflo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    136532114
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mflo03019]
    136532114
   03036 Chromosome and associated proteins [BR:mflo03036]
    136532114
Messenger RNA biogenesis [BR:mflo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     136532114
Chromosome and associated proteins [BR:mflo03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     136532114
    COMPASS/SET1 complex (yeast)
     136532114
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I WDR55 ANAPC4_WD40 NBCH_WD40 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_NUP159_NUP214 Beta-prop_SPT8 PQQ_3 Beta-prop_EIPR1 Beta-prop_WDR75_1st PQQ_2 Beta-prop_Vps41 PQQ Beta-prop_SCAP Beta-prop_WDR35_TULP_N BBS2_Mid
Other DBs
NCBI-GeneID: 136532114
NCBI-ProteinID: XP_066380823
LinkDB
Position
Unknown
AA seq 327 aa
MTSPPRVSMEITDDMLKSMEVGLAFRDYNGRISSMDFHSKATNYLVTASDDESIRLYDTQ
NAVCLKTINSKKYGVELVCFTDNPTIVLYSSKNGWDESLRLLSLNDNRFLRYFKGHLDRV
VCISFCSEKENFLSGSLDRTVLLWDQRAEKSQGLLRVQGRPAVSYDDQGMVFAVAYGGHI
RMFDARKFEKGPFEIFSVGNGDSDAHVIKFSSDGRRILLTTKAGRVHVLDSFHGNSIASY
NVKPVVTNSTLEASFSPDGNHIISGSGDGSVYAWNVRSGKVARWGSTDNEPPLVRWAPGS
LMFVTGSSELSCWVPDLSKLGSVTISK
NT seq 984 nt   +upstreamnt  +downstreamnt
atgacgagtccgccaagggtgagcatggagatcaccgacgacatgctcaagagcatggag
gtcggcctagccttccgggactataatggcagaattagttctatggattttcacagcaag
gctacaaactatctcgtgacagctagcgatgatgaatcaatccgcctatatgacactcaa
aacgcagtatgtttgaagactattaatagcaaaaaatatggcgtcgaactagtgtgcttc
actgataacccaactattgtcttatattcatcgaaaaacggctgggatgaatctctgcgt
ctactctcactgaatgataaccggtttcttagatattttaaaggtcaccttgacagggtt
gtctgcatctcattttgctctgagaaagaaaattttctctctggttcacttgaccgtact
gttctcttatgggatcaacgggctgaaaaatcacagggcttactgcgtgtgcaagggagg
cctgcagtttcatatgatgatcagggcatggtatttgcagttgcctatggtggtcacata
aggatgtttgatgctcgaaaatttgaaaaggggccttttgagattttctctgtcggtaat
ggtgattcagacgcccatgtcataaagttcagcagtgatggcaggcggattctgttaacc
actaaagctggacgtgttcatgtgctagattcattccatggcaatagcattgcatcgtac
aatgtgaagccagtggtaaccaattcgacactggaggcatcgttcagtcctgatggaaac
catatcatatctggctctggtgatggtagtgtttatgcttggaatgttaggagtggaaag
gtcgcacgctggggaagcacagataatgaaccgccactggtaaggtgggctccaggatcc
ttgatgttcgtgacaggatcatcagaactgtcatgctgggttccggatctgtccaagctg
ggatccgttaccattagcaagtag

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